Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU2541918 |
| length | 200 |
| lncRNA type | inter_gene |
| GC content | 0.34 |
| exon number | 1 |
| gene id | G2222559 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_050570.1 |
| NCBI id | CM025857.1 |
| chromosome length | 46327593 |
| location | 30587036 ~ 30587235 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU2541901 | lncRNA | upstream | 12209 | 30574517 ~ 30574827 (+) | True | G2222542 |
| TU2541886 | lncRNA | upstream | 21387 | 30565436 ~ 30565649 (+) | True | G2222527 |
| TU2541878 | lncRNA | upstream | 25510 | 30561069 ~ 30561526 (+) | True | G2222519 |
| TU2541633 | lncRNA | upstream | 174726 | 30412082 ~ 30412310 (+) | True | G2222290 |
| TU2541618 | lncRNA | upstream | 182912 | 30403917 ~ 30404124 (+) | True | G2222275 |
| TU2541922 | lncRNA | downstream | 5553 | 30592788 ~ 30593126 (+) | True | G2222563 |
| TU2541938 | lncRNA | downstream | 28529 | 30615764 ~ 30615982 (+) | True | G2222579 |
| TU2541945 | lncRNA | downstream | 33006 | 30620241 ~ 30620536 (+) | True | G2222586 |
| TU2541998 | lncRNA | downstream | 74974 | 30662209 ~ 30662577 (+) | True | G2222639 |
| TU2542072 | lncRNA | downstream | 124494 | 30711729 ~ 30711934 (+) | True | G2222713 |
| XR_005040924.1 | mRNA | upstream | 38368 | 30536236 ~ 30548668 (+) | True | LOC110521700 |
| XM_021599471.2 | mRNA | upstream | 982127 | 29598550 ~ 29604909 (+) | True | LOC110521693 |
| XM_021599467.2 | mRNA | upstream | 1283096 | 29284901 ~ 29303940 (+) | True | LOC110521691 |
| XM_021599454.2 | mRNA | upstream | 1433332 | 29130645 ~ 29153704 (+) | False | LOC100135939 |
| XM_036969302.1 | mRNA | downstream | 259446 | 30846681 ~ 30850528 (+) | False | LOC110521701 |
| XM_036969303.1 | mRNA | downstream | 259446 | 30846681 ~ 30850528 (+) | False | LOC110521701 |
| XM_036969304.1 | mRNA | downstream | 259446 | 30846681 ~ 30850528 (+) | False | LOC110521701 |
| XM_021599483.2 | mRNA | downstream | 259448 | 30846683 ~ 30850528 (+) | False | LOC110521701 |
| XM_036969305.1 | mRNA | downstream | 259448 | 30846683 ~ 30850528 (+) | True | LOC110521701 |
| TU2539452 | other | upstream | 1565154 | 29021586 ~ 29021882 (+) | True | G2220253 |
| TU2539165 | other | upstream | 2037558 | 28549029 ~ 28549478 (+) | True | G2219991 |
| TU2539163 | other | upstream | 2038952 | 28547538 ~ 28548084 (+) | True | G2219989 |
| TU2538335 | other | upstream | 2279710 | 28293895 ~ 28307326 (+) | True | fip1l1a |
| TU2538093 | other | upstream | 2743338 | 27837908 ~ 27843698 (+) | True | LOC110521656 |
| TU2542282 | other | downstream | 276589 | 30863824 ~ 30866522 (+) | True | LOC110521703 |
| TU2545552 | other | downstream | 2984905 | 33572140 ~ 33604894 (+) | True | G2225948 |
| TU2548066 | other | downstream | 4594734 | 35181969 ~ 35190151 (+) | False | LOC110521757 |
| TU2548536 | other | downstream | 4930999 | 35518234 ~ 35519242 (+) | True | G2228777 |
| TU2548634 | other | downstream | 5106075 | 35693310 ~ 35735400 (+) | True | LOC110521768 |
