Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU2554221 |
| length | 1188 |
| lncRNA type | antisense_over |
| GC content | 0.43 |
| exon number | 2 |
| gene id | G2234003 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_050570.1 |
| NCBI id | CM025857.1 |
| chromosome length | 46327593 |
| location | 39852450 ~ 39855097 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU2554219 | lncRNA | upstream | 180 | 39850597 ~ 39852270 (+) | True | G2234002 |
| TU2554138 | lncRNA | upstream | 39694 | 39808116 ~ 39812756 (+) | True | LOC110521817 |
| TU2554093 | lncRNA | upstream | 208583 | 39643647 ~ 39643867 (+) | True | G2233878 |
| TU2554089 | lncRNA | upstream | 211215 | 39640921 ~ 39641235 (+) | True | G2233874 |
| TU2554082 | lncRNA | upstream | 216966 | 39635264 ~ 39635484 (+) | True | G2233867 |
| TU2554249 | lncRNA | downstream | 55901 | 39910998 ~ 39911462 (+) | True | G2234031 |
| TU2554470 | lncRNA | downstream | 74215 | 39929312 ~ 39929520 (+) | True | G2234224 |
| TU2554565 | lncRNA | downstream | 244683 | 40099780 ~ 40100114 (+) | True | G2234313 |
| TU2554575 | lncRNA | downstream | 257676 | 40112773 ~ 40113015 (+) | True | G2234323 |
| TU2554582 | lncRNA | downstream | 269451 | 40124548 ~ 40124761 (+) | True | G2234330 |
| XM_021599704.2 | mRNA | upstream | 43800 | 39800038 ~ 39808650 (+) | False | LOC110521817 |
| XM_021599703.2 | mRNA | upstream | 43800 | 39800039 ~ 39808650 (+) | False | LOC110521817 |
| XM_021598443.2 | mRNA | upstream | 52968 | 39772446 ~ 39799482 (+) | True | LOC110521003 |
| trnaa-ugc-194 | mRNA | upstream | 63221 | 39789157 ~ 39789229 (+) | True | trnaa-ugc-194 |
| XM_021599699.2 | mRNA | upstream | 90821 | 39760125 ~ 39761629 (+) | True | LOC110521815 |
| XM_036968777.1 | mRNA | downstream | 22748 | 39877845 ~ 39906318 (+) | False | LOC110521820 |
| XM_036968778.1 | mRNA | downstream | 22748 | 39877845 ~ 39906318 (+) | True | LOC110521820 |
| XM_036969224.1 | mRNA | downstream | 56420 | 39911517 ~ 39918494 (+) | False | LOC110521821 |
| XM_036969223.1 | mRNA | downstream | 56422 | 39911519 ~ 39918494 (+) | False | LOC110521821 |
| XM_021599712.2 | mRNA | downstream | 56423 | 39911520 ~ 39918494 (+) | True | LOC110521821 |
| TU2554140 | other | upstream | 44400 | 39800273 ~ 39808050 (+) | False | LOC110521817 |
| TU2553172 | other | upstream | 675757 | 39174646 ~ 39176693 (+) | True | LOC110521001 |
| TU2552955 | other | upstream | 1039071 | 38812650 ~ 38813379 (+) | True | G2232855 |
| TU2552745 | other | upstream | 1061775 | 38790315 ~ 38790675 (+) | True | G2232661 |
| TU2551325 | other | upstream | 1515469 | 38323360 ~ 38336981 (+) | True | G2231371 |
| TU2554595 | other | downstream | 288524 | 40143621 ~ 40144782 (+) | True | pik3r3b |
| TU2555824 | other | downstream | 1247341 | 41102438 ~ 41121090 (+) | False | LOC110521828 |
| TU2556385 | other | downstream | 1530563 | 41385660 ~ 41385993 (+) | True | G2236045 |
| TU2557666 | other | downstream | 2695223 | 42550320 ~ 42553186 (+) | False | LOC110521840 |
| TU2557776 | other | downstream | 2874755 | 42729852 ~ 42730451 (+) | True | G2237341 |
