RNA id: XM_036969586.1



Basic Information


Item Value
RNA id XM_036969586.1
length 3248
RNA type mRNA
GC content 0.42
exon number 14
gene id micu3b
representative False

Chromosome Information


Item Value
chromosome id NC_050571.1
NCBI id CM025858.1
chromosome length 44108611
location 17971133 ~ 18010807 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


GAAAAGAACAGCTTGCCGCGATCTTCTGCTATGACACTTCAATGAACAACAGCCATGGCTGCCTTCCGTAGACTTATTTCCACATCGACTAATTTCTCATCTACCTCAGGGAGATTTGTATTTTGGAAACAAACACCGAAGAGAACTAAGACATTTAAACGTATTGCAACTGGAGTATGTATCGCCACCGGAGCTGGTTTCGCGAGTTATTACAATGTCCAAAATACACTGTCAAACCAAATCGATAATGGTTTACTTCTCGCATTACCAGAAGTATCTGCTACAGATAAGGCCAAGACATTTGATCTGGATGATGGGGATGTGTACATGTCGTCCCATGAGGCCAGGTTTCGGTTGTTCAGCTCAGTGGAATATGAGGGACAGCTCTATATGACCCCACTGAACTTCATTGAGTCTGTCACCATGGGTGAGCCTAAGAaAAAGAGGATTTGGAAGTCTCTAACAAAACAGGAGTTGGAACAGATGCTGGCAGACACCCCTCCTGTTTTTAAAGGATCATCCAATTTATTCAGGAACCTACGTCACCGAGGCATCATCGGTTACACAGAGTATCTATTCCTGCTCTGCATTTTAACAAAACCTCATGCTGGCTTTAAGATAGCTTTCAACATGTTTGATGCAGATGGAAACAAAATGGTGGACAAACGGGAGTTCTTGGTGCTTGAGGAAATCTTCCGTAAGAAAAAGGATAGAAAAGAAGCAGATGATGGTGCTCCAAGGTCTGACAAGCTGGTCCTTAGAAAAGAGGCCCAGCAGTTAGAGCCCCGGGGCATGTGGGATGCTCTGAGAAAGGGGGCAAGCCAAGCTCTCTTTTCTGACCTGGAGaatatagatgaaaatatGACCGACACGACCCTGCTGGTTCATTTCTTCGGGAAAAAGGGAAAGGCAGAGTTGGGCTTTGATGATTTTTACAGaTTCATGGACAACTTGCAGACAGAGGTGCTTGAGATTGAGTTCCTGTCCTATTCCAAAGGCCTGCCTATCATCAGTGAGGAGGACTTTGCCCACATCCTGTTGCGTTTCACCAACGTAGACGACATTGCAGGTTACCTGGACAATGTGCGCAAGAGCATTACAGATGAGAAGGGAATCACCTTTGATGAGTTCAGATCCTTCTTCCAATTCATGAACAACTTGGAGGATTTCGCTATAGCCATGCAAATGTACAACTTTGCCAACCGTTCCATTGGCCAAGATGAGTTGGCCCGTGCAGTCTATGTGACGACGGGGCTGAAGCTGACTGAACACCTGGTCAACACTGTGTTCCACATCTTCGACGAGGACCGTGACGGACAGCTCAGTTACAAGGAGTTCATTGGTGTCATGAAGGACCGGCTGCACCGCCGCACGgcgtTTAGAGTGGATGACAAGAAGAAGTTCACCTCTTTCAAGTCCTGTCTGAAGAAGGAGATCTCGTCAGGCAGATAGATCACCAGCTGAATGTCCTGCACTCTCAGTCTGCACCCCCCTCTACCTGGATAGACTTCCCCTGATCCATGAAGATCATTCAAAACAACAGTGCAGTTCATTTTACTATCAATGTGAAGATGAGAGAAGGATAGACTAATGTGTCAGTCTCTGCATAGTCGTCTAAAAAGtggaaatgaaatgaaatagGATTCTCCCCACCTAGGCCTAGTTGGATGCTACTCGAGTTGTTTTCAAGTTGAGATTGATGTGAGAAGGAGGATTTCTCTGACAAAGGATTTCTCTGATGACCCTAAGAGTAAGCCATTTTAAATACCTGAAGTCTTAAGCTTGTTGTTCAGCTTTCAGTCTGAAATCAACAATATGTAGTACTGTGATGTTAAGTTGCATTGATGGTATTTTATTTTTCTACCAGattgttaaaaaaaatgaaatcagGGGAATGCTATGGATCAGGACTGGTGTAACACCTTCCTGGTCTTCTACAAGTCACACGAGCTGATCGGGTCACTGGAAACTCCAACCTATTGTTGCAACAGATTTATTCACCCAGGGTGAATATATTATTGGTTCATCATTCACCATTTTACCGTATTAATTTGTTATTAATTAGTTTGTTTATCACTGTAAGTCTTTGAAAAGGAAAAACCCATTTGGTTGTTTTGTTGCTGGCAGGCTGTAgctctgacagtgtgtgtagtaTTGTTCAGTGTGGTTCCCTCCCAGTCCTAAACCTGCTAATCTGCCTCTATGCATTGCTGACATACTTTCTCCAAGCCTGTCTGCAGCCCACTGCACAGATCAGCTTACGCAGGGGAGTACAGCCTCCCTCTTGTGTTCTGTTCACACGGCTGCCTTCTGCAGCTCATTCTCAAATAACTCAGTGCCAGCTAGCTAACACCTTTCAGATTGGGCTTTTATCTCTGGGGTTCATTGTGTAAATAGAGGCAGCTAACTCCGttaataattattataatcaaGAGTTTACTCTGATGTAATGGAGAAATTCAGTGTGTATATTAACTATACACACTATTCACACTAGGCTTATTCAGACTACTGACAGGGATTCTATACAATGAGGACTTTATGAATTTGTGGTAATTGTTTTTACTAAAGGCAAAATACAATGTTTAAATAACATGAGATTACTGTTCAGAGGCGTACCTATGTTTATTTCCCAATGGGTTACCCAGGAAAATCTTATTCTACTGTGTACCATCGTgacatatatattttaaaatgtcaAATATAGTGTATATGCATTTCAGTGATGTTTTCTAGAGACTGTAGTTCTGGTCTGATGTGGTGGATTTCCTGCTTGAATAGAGACTTGGGTCTCTATTAAATCTGTATCACAGAAATTCAGCATTACAGCGTGGTTGGAATTTAAGGCAATGTTCCTGTattagcagagactgcattcattGTAAACGCTGCAGATGTCGGCTCAATAGGAAATGGCCTTTACGTGTTTAGCATGCTATCTGCAATGCTCCAGCGAAACAGATTGAACATAGCCCTTGGTTTGCTAGTTCCAATGTCTAACAATATAATCTTGTATGTTACatattaaatcaaataaatggATTTGTCTAATTCGCCTACTTCTTTGCATGGTATAACATAATACATTAGTAATGTGAATATCCTACATTTCCTCTTAGTTTACCTATTTTGAATGATGTTTGGAAGTCATGTGAATGACAGCTCTCTCTACAGAACTTTGTTTAGATGATCAAATGGATTACACAGGCTGTTACATTGACTTGGTAAATAAAGATGTTAAGAACAAT

Function


GO: NA

KEGG: NA

JBrowse2


Loading

Neighbor


RNA id RNA type direction distance location representative gene id
TU2581862 lncRNA upstream 110849 17858012 ~ 17860284 (+) True G2257070
TU2581854 lncRNA upstream 124560 17845281 ~ 17846573 (+) True G2257062
TU2581833 lncRNA upstream 126723 17843822 ~ 17844410 (+) True G2257041
TU2581834 lncRNA upstream 129803 17838106 ~ 17841330 (+) True ints6l
TU2581830 lncRNA upstream 167498 17803032 ~ 17803635 (+) True G2257038
TU2581979 lncRNA downstream 10519 18021326 ~ 18021726 (+) True G2257165
TU2582014 lncRNA downstream 76275 18087082 ~ 18087807 (+) True G2257199
TU2582060 lncRNA downstream 213617 18224424 ~ 18224639 (+) True G2257245
TU2582061 lncRNA downstream 213981 18224788 ~ 18225024 (+) True G2257246
TU2582062 lncRNA downstream 215151 18225958 ~ 18226248 (+) True G2257247
XM_036970349.1 mRNA upstream 69222 17899918 ~ 17901911 (+) True LOC118946066
XM_036969546.1 mRNA upstream 107736 17861620 ~ 17863397 (+) False pfdn6
NM_001165045.2 mRNA upstream 107739 17861879 ~ 17863394 (+) True pfdn6
XM_036970047.1 mRNA upstream 129926 17808297 ~ 17841207 (+) False ints6l
XM_036970402.1 mRNA downstream 511 18011318 ~ 18037582 (+) False zdhhc2
XM_036970403.1 mRNA downstream 511 18011318 ~ 18037582 (+) True zdhhc2
XM_036969861.1 mRNA downstream 104358 18115165 ~ 18149361 (+) False slc7a2
XM_036969862.1 mRNA downstream 104359 18115166 ~ 18149361 (+) True slc7a2
XM_021583492.2 mRNA downstream 138680 18149487 ~ 18158267 (+) True pdgfrl
TU2581622 other upstream 525203 17445566 ~ 17445930 (+) True G2256867
TU2581537 other upstream 620788 17291119 ~ 17350345 (+) True G2256788
TU2581287 other upstream 1137289 16828805 ~ 16833844 (+) True G2256591
TU2581254 other upstream 1193108 16776894 ~ 16778025 (+) True G2256563
TU2581173 other upstream 1287350 16683002 ~ 16683783 (+) True G2256494
TU2586203 other downstream 2576884 20587691 ~ 20663813 (+) True LOC110504399
TU2586351 other downstream 2935926 20946733 ~ 20947525 (+) True G2261028
TU2586702 other downstream 3431849 21442656 ~ 21443007 (+) True G2261334
TU2586787 other downstream 3741008 21751815 ~ 21772260 (+) True G2261414
TU2586776 other downstream 3937017 21947824 ~ 21953060 (+) False LOC110504779

Expression Profile


XM_036969586.1 Expression in all Baseline Samples

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XM_036969586.1 Expression in each Bioproject

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XM_036969586.1 Expression in each Sample
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The chart has 1 Y axis displaying Expression. Range: 0 to 100.
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