Gene
RNA
| Item | Value |
|---|---|
| RNA id | NM_001124666.1 |
| length | 1227 |
| RNA type | mRNA |
| GC content | 0.49 |
| exon number | 5 |
| gene id | cd40l |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_050571.1 |
| NCBI id | CM025858.1 |
| chromosome length | 44108611 |
| location | 28885566 ~ 28888962 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0006955 | immune response | biological_process |
| GO:0005615 | extracellular space | cellular_component |
| GO:0016020 | membrane | cellular_component |
| GO:0005125 | cytokine activity | molecular_function |
| GO:0005164 | tumor necrosis factor receptor binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU2594935 | lncRNA | upstream | 10406 | 28874878 ~ 28875160 (+) | True | G2268392 |
| TU2594927 | lncRNA | upstream | 19153 | 28866152 ~ 28866413 (+) | True | G2268384 |
| TU2594925 | lncRNA | upstream | 22170 | 28863080 ~ 28863396 (+) | True | G2268382 |
| TU2594923 | lncRNA | upstream | 24087 | 28861267 ~ 28861479 (+) | True | G2268380 |
| TU2594917 | lncRNA | upstream | 33511 | 28848717 ~ 28852055 (+) | True | G2268375 |
| TU2594966 | lncRNA | downstream | 34684 | 28923646 ~ 28924561 (+) | True | G2268419 |
| TU2594973 | lncRNA | downstream | 55102 | 28944064 ~ 28944558 (+) | True | G2268426 |
| TU2594982 | lncRNA | downstream | 72608 | 28961570 ~ 28961960 (+) | True | G2268435 |
| TU2595050 | lncRNA | downstream | 160186 | 29049148 ~ 29091292 (+) | True | G2268502 |
| TU2595086 | lncRNA | downstream | 213299 | 29102261 ~ 29106107 (+) | False | G2268532 |
| XM_021583835.2 | mRNA | upstream | 46888 | 28835262 ~ 28838678 (+) | False | LOC110504942 |
| XM_021583837.2 | mRNA | upstream | 46888 | 28835290 ~ 28838678 (+) | True | LOC110504942 |
| XM_036970375.1 | mRNA | upstream | 51397 | 28819095 ~ 28834169 (+) | True | LOC110504941 |
| XM_021583833.2 | mRNA | upstream | 137304 | 28728016 ~ 28748262 (+) | False | LOC110504939 |
| XM_021583832.2 | mRNA | upstream | 137304 | 28738988 ~ 28748262 (+) | True | LOC110504939 |
| XM_021583838.2 | mRNA | downstream | 39779 | 28928741 ~ 28947689 (+) | False | LOC110504943 |
| XM_021583839.2 | mRNA | downstream | 39779 | 28928741 ~ 28947689 (+) | True | LOC110504943 |
| XM_021583846.2 | mRNA | downstream | 174802 | 29063764 ~ 29068534 (+) | True | LOC110504946 |
| XR_005041173.1 | mRNA | downstream | 219082 | 29108044 ~ 29112791 (+) | True | LOC118946044 |
| XM_036969752.1 | mRNA | downstream | 607858 | 29496820 ~ 29501604 (+) | False | f9a |
| TU2594875 | other | upstream | 117837 | 28766877 ~ 28767729 (+) | True | G2268340 |
| TU2593017 | other | upstream | 1949677 | 26934720 ~ 26935889 (+) | True | G2266826 |
| TU2592839 | other | upstream | 2264618 | 26591266 ~ 26620948 (+) | True | G2266668 |
| TU2592687 | other | upstream | 2513083 | 26361992 ~ 26372483 (+) | True | LOC110504416 |
| TU2592625 | other | upstream | 2594010 | 26289825 ~ 26291556 (+) | True | LOC118946064 |
| TU2594947 | other | downstream | 7793 | 28896755 ~ 28898079 (+) | True | G2268400 |
| TU2597789 | other | downstream | 2287928 | 31176890 ~ 31181107 (+) | True | G2271027 |
| TU2599828 | other | downstream | 3974474 | 32863436 ~ 32863779 (+) | False | G2272912 |
| TU2600208 | other | downstream | 4527128 | 33416090 ~ 33421685 (+) | True | LOC110505056 |
| TU2601118 | other | downstream | 5313121 | 34202083 ~ 34207415 (+) | True | LOC110505080 |
