RNA id: trnaa-agc-14


Basic Information

Item Value
RNA id trnaa-agc-14
length 73
RNA type mRNA
GC content 0.59
exon number 1
gene id trnaa-agc-14
representative True

Chromosome Information

Item Value
chromosome id NC_050571.1
NCBI id CM025858.1
chromosome length 44108611
location 30656388 ~ 30656460 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

gggggattagcttaaatggtagagcgctcgcttagcatgcgagaggtagcgggatcgatgcccgcatcctcca

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU2597324 lncRNA upstream 17651 30635516 ~ 30638737 (+) True G2270601
TU2597323 lncRNA upstream 21617 30634503 ~ 30634771 (+) True G2270600
TU2597321 lncRNA upstream 25022 30630994 ~ 30631366 (+) True G2270598
TU2597320 lncRNA upstream 26418 30629695 ~ 30629970 (+) True G2270597
TU2597282 lncRNA upstream 48026 30606311 ~ 30608362 (+) True LOC110504990
TU2597672 lncRNA downstream 293236 30949696 ~ 30950415 (+) True trnaa-agc-199
TU2597673 lncRNA downstream 293989 30950449 ~ 30950994 (+) True G2270914
TU2597675 lncRNA downstream 295041 30951501 ~ 30951752 (+) True G2270916
TU2597680 lncRNA downstream 309850 30966310 ~ 30966549 (+) True G2270921
TU2597681 lncRNA downstream 311382 30967842 ~ 30968222 (+) True G2270922
trnaa-agc-13 mRNA upstream 2033 30654283 ~ 30654355 (+) True trnaa-agc-13
trnaa-agc-12 mRNA upstream 2345 30653971 ~ 30654043 (+) True trnaa-agc-12
trnaa-agc-11 mRNA upstream 3637 30652679 ~ 30652751 (+) False trnaa-agc-11
XM_021583914.2 mRNA upstream 45140 30600029 ~ 30611248 (+) False LOC110504990
XR_005041247.1 mRNA upstream 45140 30600029 ~ 30611248 (+) False LOC110504990
trnaa-agc-15 mRNA downstream 2014 30658474 ~ 30658546 (+) True trnaa-agc-15
trnaa-agc-16 mRNA downstream 4416 30660876 ~ 30660948 (+) True trnaa-agc-16
trnaa-agc-17 mRNA downstream 5040 30661500 ~ 30661572 (+) True trnaa-agc-17
trnaa-agc-18 mRNA downstream 5352 30661812 ~ 30661884 (+) True trnaa-agc-18
trnaa-agc-19 mRNA downstream 8080 30664540 ~ 30664612 (+) True trnaa-agc-19
TU2594947 other upstream 1758309 28896755 ~ 28898079 (+) True G2268400
TU2594875 other upstream 1888659 28766877 ~ 28767729 (+) True G2268340
TU2593017 other upstream 3720499 26934720 ~ 26935889 (+) True G2266826
TU2592839 other upstream 4035440 26591266 ~ 26620948 (+) True G2266668
TU2592687 other upstream 4283905 26361992 ~ 26372483 (+) True LOC110504416
TU2597789 other downstream 520430 31176890 ~ 31181107 (+) True G2271027
TU2599828 other downstream 2206976 32863436 ~ 32863779 (+) False G2272912
TU2600208 other downstream 2759630 33416090 ~ 33421685 (+) True LOC110505056
TU2601118 other downstream 3545623 34202083 ~ 34207415 (+) True LOC110505080
TU2601139 other downstream 3575535 34231995 ~ 34232604 (+) True G2274048