RNA id: TCONS_00005410


Basic Information

Item Value
RNA id TCONS_00005410
length 116
RNA type rRNA
GC content 0.53
exon number 1
gene id XLOC_002926
representative True

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 36163179 ~ 36163294 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

tgccacagccatatcaccctgcagcccaaaagtggttactcactgaagcaaaCAGGgcagagcctggtcagtacctggatctACACCACATGGGAAAACACGGTTGCTGATGGAAG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000176319

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00006096 lncRNA downstream 69646 35811752 ~ 36093533 (-) False XLOC_002925
TCONS_00006095 lncRNA downstream 69646 35811752 ~ 36093533 (-) True XLOC_002925
TCONS_00006094 lncRNA downstream 69686 35811752 ~ 36093493 (-) False XLOC_002925
TCONS_00006093 lncRNA downstream 69686 35811752 ~ 36093493 (-) False XLOC_002925
TCONS_00006092 lncRNA downstream 198778 35811752 ~ 35964401 (-) False XLOC_002925
TCONS_00006097 lncRNA upstream 302049 36465343 ~ 36469895 (-) True XLOC_002939
TCONS_00006098 lncRNA upstream 432086 36595380 ~ 36610901 (-) True XLOC_002942
TCONS_00006099 lncRNA upstream 478872 36642166 ~ 36650904 (-) True XLOC_002944
TCONS_00005434 lncRNA upstream 490903 36654197 ~ 36662600 (-) False XLOC_002945
TCONS_00006100 lncRNA upstream 490903 36654197 ~ 36662611 (-) True XLOC_002945
TCONS_00005409 mRNA downstream 494595 35664129 ~ 35668584 (-) True XLOC_002924
TCONS_00005405 mRNA downstream 549427 35584647 ~ 35613752 (-) True XLOC_002921
TCONS_00005404 mRNA downstream 621108 35537974 ~ 35542071 (-) True XLOC_002920
TCONS_00005402 mRNA downstream 752661 35367722 ~ 35410518 (-) False XLOC_002918
TCONS_00005400 mRNA downstream 905656 35255881 ~ 35257523 (-) True XLOC_002916
TCONS_00005411 mRNA upstream 41917 36205211 ~ 36207737 (-) True XLOC_002927
TCONS_00005412 mRNA upstream 49281 36212575 ~ 36214582 (-) True XLOC_002928
TCONS_00005413 mRNA upstream 53945 36217239 ~ 36220061 (-) True XLOC_002929
TCONS_00005414 mRNA upstream 58211 36221505 ~ 36223005 (-) True XLOC_002930
TCONS_00005415 mRNA upstream 61176 36224470 ~ 36225729 (-) True XLOC_002931
TCONS_00005408 other downstream 508825 35654245 ~ 35654354 (-) True XLOC_002923
TCONS_00005406 other downstream 542730 35620333 ~ 35620449 (-) True XLOC_002922
TCONS_00005403 other downstream 775937 35369837 ~ 35387242 (-) True XLOC_002918
TCONS_00005381 other downstream 1170765 34984618 ~ 34992414 (-) False XLOC_002907
TCONS_00005358 other downstream 1835785 34327262 ~ 34327394 (-) True XLOC_002902
TCONS_00005427 other upstream 324324 36487618 ~ 36502331 (-) True XLOC_002940
TCONS_00005438 other upstream 518358 36681652 ~ 36682514 (-) True XLOC_002946
TCONS_00005456 other upstream 1189186 37352480 ~ 37357303 (-) True XLOC_002957
TCONS_00005460 other upstream 1888358 38051652 ~ 38051766 (-) False XLOC_002962
TCONS_00005461 other upstream 1908783 38072077 ~ 38072168 (-) True XLOC_002963