RNA id: TU2567210



Basic Information


Item Value
RNA id TU2567210
length 264
lncRNA type inter_gene
GC content 0.67
exon number 1
gene id G2245014
representative True

Chromosome Information


Item Value
chromosome id NC_050571.1
NCBI id CM025858.1
chromosome length 44108611
location 4408750 ~ 4409013 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ggctcaggacagacgggcggctctggcggctcaggacagacgggagactctggcggctcaggacagacgggagactctggcggctcaggacagacgggagactctggcggctcaggacagacgggagactctggcggctcaggacagacgggagactctggcggctcaggacagacgggagactctggcggctcaggacagacgggagactctggcggctcaggacagacgggagactctggcggctcaggacagaagggagac

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2567207 lncRNA downstream 10497 4397181 ~ 4398253 (-) False G2245011
TU2567206 lncRNA downstream 10497 4397674 ~ 4398253 (-) True G2245011
TU2567205 lncRNA downstream 11096 4397181 ~ 4397654 (-) False G2245011
TU2567202 lncRNA downstream 12968 4395533 ~ 4395782 (-) True G2245008
TU2567190 lncRNA downstream 17804 4390011 ~ 4390946 (-) True G2245000
TU2567216 lncRNA upstream 12868 4421881 ~ 4422181 (-) True G2245019
TU2567339 lncRNA upstream 48636 4457649 ~ 4458007 (-) True G2245128
TU2567340 lncRNA upstream 57277 4466290 ~ 4466502 (-) True G2245129
TU2567384 lncRNA upstream 134272 4543285 ~ 4543871 (-) True G2245166
TU2567386 lncRNA upstream 141652 4550665 ~ 4551406 (-) True G2245168
XM_036970240.1 mRNA downstream 118259 4237048 ~ 4290491 (-) True LOC110513918
XM_036970239.1 mRNA downstream 121553 4236169 ~ 4287197 (-) False LOC110513918
XM_036970241.1 mRNA downstream 121553 4236169 ~ 4287197 (-) False LOC110513918
XM_036970242.1 mRNA downstream 121553 4236169 ~ 4287197 (-) False LOC110513918
XM_036970246.1 mRNA downstream 208807 4130654 ~ 4199943 (-) True LOC110504518
XM_021583225.2 mRNA upstream 180420 4589433 ~ 4594305 (-) False LOC110504469
XR_005041129.1 mRNA upstream 180420 4589433 ~ 4594305 (-) False LOC110504469
XM_036969659.1 mRNA upstream 378426 4787439 ~ 4788320 (-) True LOC118945992
XM_036969869.1 mRNA upstream 1079716 5488729 ~ 5526785 (-) False LOC110504358
XM_036969870.1 mRNA upstream 1079716 5488729 ~ 5526792 (-) False LOC110504358
TU2566964 other downstream 295749 4111702 ~ 4113001 (-) False G2244811
TU2566965 other downstream 295749 4111702 ~ 4113001 (-) False G2244811
TU2566966 other downstream 295749 4111702 ~ 4113001 (-) True G2244811
TU2566928 other downstream 308078 4098767 ~ 4100672 (-) True higd2a
TU2565787 other downstream 1471208 2936708 ~ 2937542 (-) True G2243801
TU2567370 other upstream 126828 4535841 ~ 4621990 (-) True G2245152
TU2568854 other upstream 1439106 5848119 ~ 5852202 (-) False G2246314
TU2568862 other upstream 1439106 5848119 ~ 5852599 (-) True G2246314
TU2570139 other upstream 2461574 6870587 ~ 6871100 (-) True G2247416
TU2570306 other upstream 2529610 6938623 ~ 7024539 (-) False G2247565

Expression Profile