RNA id: TU2572681



Basic Information


Item Value
RNA id TU2572681
length 254
RNA type TUCP
GC content 0.57
exon number 1
gene id G2249506
representative True

Chromosome Information


Item Value
chromosome id NC_050571.1
NCBI id CM025858.1
chromosome length 44108611
location 9149888 ~ 9150141 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ATGAAGgtggatgagaggaagaggaagtaCAACAGCCTGCAGGAGATCAAGGAGCCCACGGAGGAGGATATGGAGGCCTTCAGGATGAAACGCTCCAGGGAAGACGACCCCATGGCCAACTTCCTGGAGCTGGGACAGTGATAGCGACAACCCCATACTCTATGCTcgcccctacctacagtataccctCCACCCTCTCATCCCAGCCCTGTAccccctaccctctcctctcaccctctaccctaccctctcct

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2572672 lncRNA downstream 15338 9134284 ~ 9134550 (-) True G2249497
TU2572669 lncRNA downstream 18737 9130915 ~ 9131151 (-) True G2249494
TU2572661 lncRNA downstream 46732 9102889 ~ 9103156 (-) True G2249486
TU2572611 lncRNA downstream 138804 9010640 ~ 9011084 (-) False G2249442
TU2572682 lncRNA upstream 200 9150341 ~ 9151226 (-) True G2249507
TU2572683 lncRNA upstream 1207 9151348 ~ 9151557 (-) True G2249508
TU2572824 lncRNA upstream 5312 9155453 ~ 9155873 (-) True G2249621
TU2572810 lncRNA upstream 10061 9160202 ~ 9161785 (-) False LOC110504362
TU2572811 lncRNA upstream 10061 9160202 ~ 9162076 (-) False LOC110504362
XM_021583284.2 mRNA downstream 972 9145591 ~ 9148916 (-) False c1qtnf2
XM_036969786.1 mRNA downstream 972 9145591 ~ 9148916 (-) False c1qtnf2
XM_021583285.2 mRNA downstream 1553 9145591 ~ 9148335 (-) False c1qtnf2
XM_036969787.1 mRNA downstream 1914 9145591 ~ 9147974 (-) False c1qtnf2
XM_036969785.1 mRNA downstream 4405 9106690 ~ 9145483 (-) True LOC110504527
XM_036970035.1 mRNA upstream 3091 9153232 ~ 9197578 (-) False LOC110504362
XM_036970033.1 mRNA upstream 10055 9160196 ~ 9196237 (-) False LOC110504362
XM_036970034.1 mRNA upstream 10055 9160196 ~ 9197578 (-) False LOC110504362
XM_036970036.1 mRNA upstream 47569 9197710 ~ 9200039 (-) True LOC110504530
LOC110504532 mRNA upstream 57036 9207177 ~ 9211391 (-) True LOC110504532
TU2572664 other downstream 1586 9146791 ~ 9148302 (-) True c1qtnf2
TU2571633 other downstream 992355 8153911 ~ 8157533 (-) False G2248668
TU2571635 other downstream 992355 8153911 ~ 8157533 (-) False G2248668
TU2571450 other downstream 1108408 8040876 ~ 8041480 (-) True G2248522
TU2570603 other downstream 1893948 7255344 ~ 7255940 (-) True G2247813
TU2573640 other upstream 802176 9952317 ~ 9952703 (-) True G2250247
TU2574242 other upstream 1375650 10525791 ~ 10526568 (-) True G2250775
TU2575152 other upstream 1547051 10697192 ~ 10698407 (-) True G2251534
TU2575393 other upstream 1937728 11087869 ~ 11092460 (-) True G2251734
TU2575442 other upstream 2029866 11180007 ~ 11183379 (-) False LOC118946018

Expression Profile