RNA id: TU2589841



Basic Information


Item Value
RNA id TU2589841
length 256
lncRNA type antisense_over
GC content 0.50
exon number 1
gene id G2264205
representative True

Chromosome Information


Item Value
chromosome id NC_050571.1
NCBI id CM025858.1
chromosome length 44108611
location 23872590 ~ 23872845 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


GGACTATACAGGTACAGCAACATTGATTAGTATGTGTAATCATAGCAGGACTCTGGGCTAGAGCAGAGAAGAAAATGCTCCTCCAAccttgtctcctctgtctccccggGATCCCTTCTCACCAATCAGGCCTGGGAAACCctgtagagagaggaacaggttaGTGTGTGCTGCAGGGAGTTCCCTGTGTCATAGAGTGGCAGGTCAAAGGTCAAAAACACTTTCATCCTTACATCCATTCCAGGCTCCCCGGACT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2589839 lncRNA upstream 4565 23867611 ~ 23868025 (+) True G2264203
TU2589729 lncRNA upstream 8617 23855902 ~ 23863973 (+) True G2264113
TU2589726 lncRNA upstream 16417 23855609 ~ 23856173 (+) False G2264113
TU2589830 lncRNA upstream 24889 23846256 ~ 23847701 (+) True G2264196
TU2589826 lncRNA upstream 30183 23836618 ~ 23842407 (+) True LOC110504805
TU2589843 lncRNA downstream 3126 23875971 ~ 23877487 (+) False G2264207
TU2589844 lncRNA downstream 3126 23875971 ~ 23877487 (+) True G2264207
TU2589846 lncRNA downstream 7066 23879911 ~ 23880135 (+) True G2264209
TU2589850 lncRNA downstream 13502 23886347 ~ 23886888 (+) True G2264213
TU2589853 lncRNA downstream 22497 23895342 ~ 23940695 (+) True G2264216
XR_002470644.2 mRNA upstream 30172 23836894 ~ 23842418 (+) False LOC110504805
XM_021583610.2 mRNA upstream 170802 23694188 ~ 23701788 (+) True LOC110504797
XM_036970070.1 mRNA upstream 191956 23675075 ~ 23680634 (+) True LOC110504798
XM_036970202.1 mRNA upstream 733685 23048270 ~ 23138905 (+) False htr4
XM_021583644.2 mRNA downstream 980188 24853033 ~ 24856333 (+) False LOC110504821
XM_036970453.1 mRNA downstream 1131428 25004273 ~ 25011653 (+) False LOC110504822
XM_021583649.2 mRNA downstream 1131443 25004288 ~ 25011653 (+) True LOC110504822
XM_036970021.1 mRNA downstream 1192643 25065488 ~ 25080226 (+) False LOC110504823
XM_036970022.1 mRNA downstream 1192654 25065499 ~ 25080226 (+) False LOC110504823
TU2589730 other upstream 8617 23855609 ~ 23863973 (+) False G2264113
TU2589732 other upstream 161504 23697688 ~ 23711086 (+) True G2264115
TU2589532 other upstream 346570 23525340 ~ 23526020 (+) True G2263926
TU2588083 other upstream 1598883 22269718 ~ 22273707 (+) True G2262601
TU2586965 other upstream 1863842 22008112 ~ 22008748 (+) True G2261587
TU2589847 other downstream 7936 23880781 ~ 23881032 (+) True G2264210
TU2589998 other downstream 317228 24190073 ~ 24190352 (+) True G2264344
TU2589999 other downstream 317905 24190750 ~ 24191035 (+) True G2264345
TU2591263 other downstream 1342806 25215651 ~ 25244329 (+) True G2265425
TU2591464 other downstream 1709148 25581993 ~ 25586067 (+) True si:dkey-74k8.4

Expression Profile