RNA id: TU2591668


Basic Information

Item Value
RNA id TU2591668
length 212
lncRNA type inter_gene
GC content 0.45
exon number 1
gene id G2265743
representative True

Chromosome Information

Item Value
chromosome id NC_050571.1
NCBI id CM025858.1
chromosome length 44108611
location 25977885 ~ 25978096 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

CCCACATTTTCAATTTCCATGCCAGAGTTTATACTAtccttctctgtctctgagaCAAGTTCCATGCTCGCGCTTATACTAtccttctctgtctctgagaCCAGTTCCATGCCAGCGTTTATACTATCCTTCTCTATCTCAGAGACCAGTTCCATGCCAGCGCTTATACTAtccttctctgtctctgagaCCAGTTCCATGCCAACGCTTAT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU2591652 lncRNA upstream 25924 25951652 ~ 25951961 (+) True G2265731
TU2591609 lncRNA upstream 141511 25835921 ~ 25836374 (+) True G2265700
TU2591607 lncRNA upstream 153156 25824371 ~ 25824729 (+) True G2265698
TU2591579 lncRNA upstream 158593 25816909 ~ 25819292 (+) True LOC110504413
TU2591462 lncRNA upstream 391157 25581993 ~ 25586728 (+) False si:dkey-74k8.4
TU2591671 lncRNA downstream 4492 25982588 ~ 25984895 (+) True G2265746
TU2591686 lncRNA downstream 50225 26028321 ~ 26029603 (+) True G2265758
TU2591695 lncRNA downstream 61325 26039421 ~ 26039783 (+) True G2265766
TU2591704 lncRNA downstream 83838 26061934 ~ 26071365 (+) True G2265775
TU2591707 lncRNA downstream 84961 26063057 ~ 26113361 (+) True G2265778
XM_021583711.2 mRNA upstream 47281 25880623 ~ 25930604 (+) False LOC110504854
XM_036969972.1 mRNA upstream 47281 25909671 ~ 25930604 (+) True LOC110504854
XM_036969803.1 mRNA upstream 139388 25820435 ~ 25838497 (+) False LOC110504852
XM_036969802.1 mRNA upstream 139388 25820488 ~ 25838497 (+) False LOC110504852
XM_036969804.1 mRNA upstream 157875 25756889 ~ 25820010 (+) False LOC110504413
XM_036969568.1 mRNA downstream 2826 25980922 ~ 26117728 (+) False LOC110504415
XM_036969569.1 mRNA downstream 2826 25980922 ~ 26117728 (+) True LOC110504415
XM_036970441.1 mRNA downstream 234913 26213009 ~ 26276405 (+) True LOC110504418
XM_036970342.1 mRNA downstream 312785 26290881 ~ 26291670 (+) False LOC118946064
XM_036970339.1 mRNA downstream 320679 26298775 ~ 26483992 (+) False LOC110504416
TU2591580 other upstream 152345 25824040 ~ 25825540 (+) True LOC110504852
TU2591497 other upstream 351029 25625145 ~ 25626856 (+) False G2265625
TU2591501 other upstream 351029 25625145 ~ 25626856 (+) True G2265625
TU2591464 other upstream 391818 25581993 ~ 25586067 (+) True si:dkey-74k8.4
TU2591263 other upstream 733556 25215651 ~ 25244329 (+) True G2265425
TU2591669 other downstream 39 25978135 ~ 25978638 (+) True G2265744
TU2592624 other downstream 311629 26289725 ~ 26292004 (+) False LOC118946064
TU2592627 other downstream 311629 26289725 ~ 26291661 (+) False LOC118946064
TU2592632 other downstream 311629 26289725 ~ 26291556 (+) False LOC118946064
TU2592622 other downstream 311729 26289825 ~ 26292004 (+) False LOC118946064

Expression Profile