RNA id: TU2591724


Basic Information

Item Value
RNA id TU2591724
length 405
lncRNA type intronic
GC content 0.35
exon number 2
gene id G2265794
representative True

Chromosome Information

Item Value
chromosome id NC_050571.1
NCBI id CM025858.1
chromosome length 44108611
location 26098885 ~ 26099561 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

tggtaatggtagtagtagagatattagatgTAGTTaaactactagtggtaatggtagtagtagtgatattagaggtagaaattctactagtggtaatggtagtagtagagatattagatgTAGTTaaactactagtggtaatggtagtagtagagatattataGGTAGTTaaactactagtggtaatggtagtagtagagatattagatgTAGTTaaactactagtggtaatggtagtagtagagatattagatgTAGTTaaactactagtggtaatggtagtagtagagatattagagGTAGTTaaactactagtggtaatggtagtagtagagatatgggtgaaataccacagtgagaatgatggagggatgagagtgagggagatagagaggggaaagagag

Function

GO: NA

KEGG:

id description

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU2591704 lncRNA upstream 27520 26061934 ~ 26071365 (+) True G2265775
TU2591695 lncRNA upstream 59102 26039421 ~ 26039783 (+) True G2265766
TU2591686 lncRNA upstream 69282 26028321 ~ 26029603 (+) True G2265758
TU2591671 lncRNA upstream 113990 25982588 ~ 25984895 (+) True G2265746
TU2591668 lncRNA upstream 120789 25977885 ~ 25978096 (+) True G2265743
TU2591734 lncRNA downstream 23036 26122597 ~ 26122929 (+) True G2265802
TU2591747 lncRNA downstream 39728 26139289 ~ 26139589 (+) True G2265814
TU2591756 lncRNA downstream 56783 26156344 ~ 26156543 (+) True G2265819
TU2591757 lncRNA downstream 57325 26156886 ~ 26157116 (+) True G2265820
TU2592583 lncRNA downstream 115207 26214768 ~ 26214985 (+) True G2266454
XM_021583711.2 mRNA upstream 168281 25880623 ~ 25930604 (+) False LOC110504854
XM_036969972.1 mRNA upstream 168281 25909671 ~ 25930604 (+) True LOC110504854
XM_036969803.1 mRNA upstream 260388 25820435 ~ 25838497 (+) False LOC110504852
XM_036969802.1 mRNA upstream 260388 25820488 ~ 25838497 (+) False LOC110504852
XM_036969804.1 mRNA upstream 278875 25756889 ~ 25820010 (+) False LOC110504413
XM_036970441.1 mRNA downstream 113448 26213009 ~ 26276405 (+) True LOC110504418
XM_036970342.1 mRNA downstream 191320 26290881 ~ 26291670 (+) False LOC118946064
XM_036970339.1 mRNA downstream 199214 26298775 ~ 26483992 (+) False LOC110504416
XM_036970340.1 mRNA downstream 199214 26298775 ~ 26483992 (+) False LOC110504416
XM_036970341.1 mRNA downstream 199214 26298775 ~ 26483992 (+) False LOC110504416
TU2591669 other upstream 120247 25978135 ~ 25978638 (+) True G2265744
TU2591580 other upstream 273345 25824040 ~ 25825540 (+) True LOC110504852
TU2591497 other upstream 472029 25625145 ~ 25626856 (+) False G2265625
TU2591501 other upstream 472029 25625145 ~ 25626856 (+) True G2265625
TU2591464 other upstream 512818 25581993 ~ 25586067 (+) True si:dkey-74k8.4
TU2592624 other downstream 190164 26289725 ~ 26292004 (+) False LOC118946064
TU2592627 other downstream 190164 26289725 ~ 26291661 (+) False LOC118946064
TU2592632 other downstream 190164 26289725 ~ 26291556 (+) False LOC118946064
TU2592622 other downstream 190264 26289825 ~ 26292004 (+) False LOC118946064
TU2592623 other downstream 190264 26289825 ~ 26291661 (+) False LOC118946064

Expression Profile