RNA id: TU2591756


Basic Information

Item Value
RNA id TU2591756
length 200
lncRNA type inter_gene
GC content 0.46
exon number 1
gene id G2265819
representative True

Chromosome Information

Item Value
chromosome id NC_050571.1
NCBI id CM025858.1
chromosome length 44108611
location 26156344 ~ 26156543 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

aataaatatttactctgagctgcgcttcagtaggttggtggtagatggaagaccttgttgccaaaccgagtcctctatcctttgaagaatgtctctggtggtcacttggataagttgtagtaacgtcgttgtgtggtagatgggatactctgtctgttccttcctaacctgcgtttgcagctgcgttcgctaactcaacg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU2591747 lncRNA upstream 16755 26139289 ~ 26139589 (+) True G2265814
TU2591734 lncRNA upstream 33415 26122597 ~ 26122929 (+) True G2265802
TU2591707 lncRNA upstream 42983 26063057 ~ 26113361 (+) True G2265778
TU2591724 lncRNA upstream 56783 26098885 ~ 26099561 (+) True G2265794
TU2591704 lncRNA upstream 84979 26061934 ~ 26071365 (+) True G2265775
TU2591757 lncRNA downstream 343 26156886 ~ 26157116 (+) True G2265820
TU2592583 lncRNA downstream 58225 26214768 ~ 26214985 (+) True G2266454
TU2592584 lncRNA downstream 59323 26215866 ~ 26216106 (+) True G2266455
TU2592596 lncRNA downstream 68754 26225297 ~ 26225530 (+) True G2266467
TU2592676 lncRNA downstream 140616 26297159 ~ 26297884 (+) False G2266528
XM_036969568.1 mRNA upstream 38616 25980922 ~ 26117728 (+) False LOC110504415
XM_036969569.1 mRNA upstream 38616 25980922 ~ 26117728 (+) True LOC110504415
XM_021583711.2 mRNA upstream 225740 25880623 ~ 25930604 (+) False LOC110504854
XM_036969972.1 mRNA upstream 225740 25909671 ~ 25930604 (+) True LOC110504854
XM_036969802.1 mRNA upstream 317847 25820488 ~ 25838497 (+) False LOC110504852
XM_036970441.1 mRNA downstream 56466 26213009 ~ 26276405 (+) True LOC110504418
XM_036970342.1 mRNA downstream 134338 26290881 ~ 26291670 (+) False LOC118946064
XM_036970339.1 mRNA downstream 142232 26298775 ~ 26483992 (+) False LOC110504416
XM_036970340.1 mRNA downstream 142232 26298775 ~ 26483992 (+) False LOC110504416
XM_036970341.1 mRNA downstream 142232 26298775 ~ 26483992 (+) False LOC110504416
TU2591669 other upstream 177706 25978135 ~ 25978638 (+) True G2265744
TU2591580 other upstream 330804 25824040 ~ 25825540 (+) True LOC110504852
TU2591497 other upstream 529488 25625145 ~ 25626856 (+) False G2265625
TU2591501 other upstream 529488 25625145 ~ 25626856 (+) True G2265625
TU2591464 other upstream 570277 25581993 ~ 25586067 (+) True si:dkey-74k8.4
TU2592624 other downstream 133182 26289725 ~ 26292004 (+) False LOC118946064
TU2592627 other downstream 133182 26289725 ~ 26291661 (+) False LOC118946064
TU2592632 other downstream 133182 26289725 ~ 26291556 (+) False LOC118946064
TU2592622 other downstream 133282 26289825 ~ 26292004 (+) False LOC118946064
TU2592623 other downstream 133282 26289825 ~ 26291661 (+) False LOC118946064

Expression Profile