RNA id: TU2593614



Basic Information


Item Value
RNA id TU2593614
length 661
lncRNA type intronic
GC content 0.44
exon number 3
gene id G2267296
representative True

Chromosome Information


Item Value
chromosome id NC_050571.1
NCBI id CM025858.1
chromosome length 44108611
location 27183781 ~ 27186357 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


TGACGTGTTCCGTATGGAGAAACGACAACAACATGACTGACGTGTTCTGTATGGAGAAACGACAACAACATGACTGACGTGTTCTGTATGGAGAAACGACAACAACATGACTGATGTGTTCTGTATGGAGAAACGACAACAACATGACTGATGTGTTCTGTATGGAGAAACGACAACATCACTGCTGTGTTCTGTATGGAGAGACAACATGACTGCCGTGTTCTGTATGGAGAAACGACAACATCACTGCTGTGTTCTGTATGGAGAGACAACATGACTGCCGTGTTCTGTATGGAGAAACGACAACATGACTGACGTGTTCTGTATGGAGAGACAACATGACTGCCGTGTTCTGTATGGAGAGACAACATGACTGCCGTGTTCTGTATGGAGAAACGACAACAACATGACTGATGTGTTCTGTATGGAGAAACGACAACATGACTGATGTGTTCTGTATGGAGAAACGACAACATGACTGATGTGTTCTGTATGGAGAAACGACAACATGACTGATGTGTTCTGTATGGAGAAACGACAACATGACTGATGTGTTCTGTATGGAGAAACGACAACATGACTGATGTGTTCTGTATGGAGAAACGACAACAACATGACTGATGTGTTCTGTATGGAGAAACGACAACATGACTGCCGTGTT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2593574 lncRNA upstream 73791 27109551 ~ 27109990 (+) True G2267264
TU2593556 lncRNA upstream 95232 27088334 ~ 27088549 (+) True G2267249
TU2593543 lncRNA upstream 104513 27079048 ~ 27079268 (+) True G2267236
TU2593416 lncRNA upstream 180105 27003437 ~ 27003676 (+) True G2267173
TU2593045 lncRNA upstream 191040 26992440 ~ 26992741 (+) True G2266850
TU2593565 lncRNA downstream 7220 27193577 ~ 27193904 (+) True G2267258
TU2593625 lncRNA downstream 17948 27204305 ~ 27210378 (+) False G2267305
TU2593626 lncRNA downstream 17948 27204305 ~ 27210378 (+) False G2267305
TU2593627 lncRNA downstream 17948 27204305 ~ 27265218 (+) False G2267305
TU2593628 lncRNA downstream 17948 27204305 ~ 27210378 (+) False G2267305
XM_036970494.1 mRNA upstream 9661 27125620 ~ 27174120 (+) True LOC110504898
XM_036970339.1 mRNA upstream 699789 26298775 ~ 26483992 (+) False LOC110504416
XM_036970340.1 mRNA upstream 699789 26298775 ~ 26483992 (+) False LOC110504416
XM_036970341.1 mRNA upstream 699789 26298775 ~ 26483992 (+) False LOC110504416
XM_036970342.1 mRNA upstream 892111 26290881 ~ 26291670 (+) False LOC118946064
XM_021583773.2 mRNA downstream 513332 27699689 ~ 27711246 (+) False LOC110504902
XM_021583772.2 mRNA downstream 513334 27699691 ~ 27711246 (+) False LOC110504902
XM_036970184.1 mRNA downstream 513334 27699691 ~ 27711246 (+) True LOC110504902
XM_036969915.1 mRNA downstream 525395 27711752 ~ 27774452 (+) False LOC110504904
XM_036969916.1 mRNA downstream 525395 27711752 ~ 27774452 (+) False LOC110504904
TU2593017 other upstream 247892 26934720 ~ 26935889 (+) True G2266826
TU2592839 other upstream 562833 26591266 ~ 26620948 (+) True G2266668
TU2592687 other upstream 811298 26361992 ~ 26372483 (+) True LOC110504416
TU2592623 other upstream 892120 26289825 ~ 26291661 (+) False LOC118946064
TU2594875 other downstream 1580520 28766877 ~ 28767729 (+) True G2268340
TU2594947 other downstream 1710398 28896755 ~ 28898079 (+) True G2268400
TU2597789 other downstream 3990533 31176890 ~ 31181107 (+) True G2271027
TU2599828 other downstream 5677079 32863436 ~ 32863779 (+) False G2272912
TU2600208 other downstream 6229733 33416090 ~ 33421685 (+) True LOC110505056

Expression Profile