RNA id: TU2593684



Basic Information


Item Value
RNA id TU2593684
length 209
lncRNA type intronic
GC content 0.48
exon number 2
gene id G2267352
representative True

Chromosome Information


Item Value
chromosome id NC_050571.1
NCBI id CM025858.1
chromosome length 44108611
location 27287631 ~ 27287872 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


cctctttcactatccctctctcctcttttactgttcctctctccttctctctctgctctttcactctccctctctccttcactctgtgctctttcactctccctctctcctctttcactatatctctctccttctctctcgcctcTTTCATTatcccactctccttctccctctcctcttttactatccctctctccttctctctctac

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2593630 lncRNA upstream 5645 27204305 ~ 27281986 (+) False G2267305
TU2593634 lncRNA upstream 9315 27204305 ~ 27278316 (+) False G2267305
TU2593666 lncRNA upstream 20874 27266332 ~ 27266757 (+) True G2267334
TU2593627 lncRNA upstream 22413 27204305 ~ 27265218 (+) False G2267305
TU2593635 lncRNA upstream 74410 27204305 ~ 27213221 (+) True G2267305
TU2593692 lncRNA downstream 17938 27305810 ~ 27306241 (+) True G2267360
TU2593804 lncRNA downstream 193643 27481515 ~ 27503158 (+) True G2267437
TU2593830 lncRNA downstream 271006 27558878 ~ 27571059 (+) True G2267461
TU2593849 lncRNA downstream 329385 27617257 ~ 27617568 (+) True G2267479
TU2594322 lncRNA downstream 414236 27702108 ~ 27702628 (+) True G2267845
XM_036970494.1 mRNA upstream 113511 27125620 ~ 27174120 (+) True LOC110504898
XM_036970339.1 mRNA upstream 803639 26298775 ~ 26483992 (+) False LOC110504416
XM_036970340.1 mRNA upstream 803639 26298775 ~ 26483992 (+) False LOC110504416
XM_036970341.1 mRNA upstream 803639 26298775 ~ 26483992 (+) False LOC110504416
XM_036970342.1 mRNA upstream 995961 26290881 ~ 26291670 (+) False LOC118946064
XM_021583773.2 mRNA downstream 411817 27699689 ~ 27711246 (+) False LOC110504902
XM_021583772.2 mRNA downstream 411819 27699691 ~ 27711246 (+) False LOC110504902
XM_036970184.1 mRNA downstream 411819 27699691 ~ 27711246 (+) True LOC110504902
XM_036969915.1 mRNA downstream 423880 27711752 ~ 27774452 (+) False LOC110504904
XM_036969916.1 mRNA downstream 423880 27711752 ~ 27774452 (+) False LOC110504904
TU2593017 other upstream 351742 26934720 ~ 26935889 (+) True G2266826
TU2592839 other upstream 666683 26591266 ~ 26620948 (+) True G2266668
TU2592687 other upstream 915148 26361992 ~ 26372483 (+) True LOC110504416
TU2592623 other upstream 995970 26289825 ~ 26291661 (+) False LOC118946064
TU2594875 other downstream 1479005 28766877 ~ 28767729 (+) True G2268340
TU2594947 other downstream 1608883 28896755 ~ 28898079 (+) True G2268400
TU2597789 other downstream 3889018 31176890 ~ 31181107 (+) True G2271027
TU2599828 other downstream 5575564 32863436 ~ 32863779 (+) False G2272912
TU2600208 other downstream 6128218 33416090 ~ 33421685 (+) True LOC110505056

Expression Profile