RNA id: XM_036970862.1


Basic Information

Item Value
RNA id XM_036970862.1
length 3468
RNA type mRNA
GC content 0.52
exon number 10
gene id LOC110513484
representative True

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 10404372 ~ 10427604 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

GCGCCTGCGCCAATTCTATTAAACCAAGAACGGACTGGGCTCAAGGGAAGAAGACAGAACGGGAAGAAGAAGATCAGAGGAACCGAAACAACCTGCGAGAGTGAAAAAGAGACCAATAGCAACCGTAAAAGTCACGGTTATCCACCTTAATTTTTGTTGGTTAAGGATAGTGCTATGAAAATGAACCAGTGCGTGCACGGGATGATCTATCTGGCGGTTCTGGTGGCGTTTGCCGCCTGTGACGCACCTCCGGTACCGTTAGATGACATCGTGATTGAGAAAACGTTCGTGCCGGAGCAGTGCGGGCGCGCTGTGAAAGTAGGGGACTATGTCCGTTACCACTATAACGGCATGTTCCCCGATGGAAAGAAGTTTGACTCCAGCTATGACCGCGGTAGCACCTACAATGTTTATGTGGGTAAGAAGCAGCTGATTGAAGGGATGGACAGAGCTCTGGTAGGGATGTGTGTCAACGAGAGACGCCTGGTCACCATCCCCCCACAACTGGCCTATGGGAAGGAAGGATACGGTGATGTCATCCCTTCAGACGCAATCCTCCATTTTGACGTTCTGTTGTTGGACGTGTGGAACCCTGACGACGGGGTTCAGAGTGAGACGTACTACACCCCTGAGAACTGCTCTAGGAAGGTAGAGGTGTCAGACTACGTACGATACCACTACAACGGAACACTGCTGGACGGAACACTGTTCGACTCCAGcCACACCCGTTTGCGTACCTACGACACCTACGTGGGGATTGGCTGGCTGATCGCTGGCATGGACCAGGGCCTTCTGGGCATGTGTGTTGGGGAGAGACGCATCATCACCATGCCCCCTTCGCTAGGATACGGATCAAACGGAGATGGTAGTGATATCCCAGGCCAGGCTTCCCTGGTGTTTGATGTAGTCCTCTTGGACCTCCATAACCCTAAAGACGGCGTCACTATAACCAACCAGGACATACCTCAACCCTGCCTCAGGAAGAGTATATCTGGGGACTTTATCAGATACCACTACAACGGATCACTACTGGACGGGACCTTCTTTGACTCCAGTTACTCTCGTAACCGTACCTATGACACGTACGTGGGTAAGGGCTCTTTGATTGGTGGGATGGACGAGGGCCTGATCGGAGTCTGCATCGGAGAGAGAAGACGCATCACCATCCCACCTCACCTCGGATACGGAGAGGAGGGTACAGgtacTAAGATCCCAGGTTCTGCTGTCTTGGTGTTTGATATCCATATCATAGACTTCCACAACCCATCAGACACAGTGGTGATCACCACCAACTATAAACCAGAGGTGTGTGAGACGCTGGCTAAGAAAGGAGACTTTGTTAAATACCACTACAACGCTTCACTCATGGATGGATCCTTCATCGACTCCACgtataACTATGGGAAGACATATAACATTGTGCTGGGAGCCAACCAGGTGGTTCCTGGGATGGAGGAAGGGCTGAAGGAGATGTGTGTTGGAGAGAGAAGACACCTGGTCATACCTCCTCACCTGGGCtacggagagaggggagtggATGGTGAGGTGCCGGCCAGTGCTGTCCTGGTCTTCAACATCGAGATGATCGAGATGGAGGCGGGCCTTCCTGATGGGTACATGTTCATCTGGAACGAGGAGGTATCAGCTGACCTCTTCACTGAGATGGACGCAGACAAGGACCTACAGGTGTTGGCCTCAGAGTTCTCAGACTATATCCTGCGTCAGGTGAACGAGGGTAAAGGTCGCCTTGCCCCTGGGTTTAGCGCAAATCTCATCATCGAGAACATGTTCTCCAACCAGGACCGTAATGGAGACGGAAAGATCACTGAGGAGGAGTTCAAACTGAAGGCCGACGAGACACCACACGACGAGCTATAAGACAGACTAGACCCCACACGACGAGCTATAAGACAGACTAGACCCCACACGACGAGCTATAAGAGAGATGAGACCCCACACGACGAGCTATAAGAGAGACGAGACCCCACACGACGAGCTATAAGACAGACTAGACCCCACACGACGAGCTATAAGACAGACTAGACCCCACACGACGAGCTATAAGACAGACTAGACCCCACGCGACGAGCTATAAGACAGACTAGACCCCACAAGACGAGCTATAAGAGAGATGAGACCCCACACGACGAGCTATAAGAGAGATGAGACCCCACACGACGAGCTATAAGACAGACTAGACCCCACACGACGAGCTATAAGACAGACTAGACCCCACACGACGAGCTATAAGACAGACCAGACCCCACACGACCAGCTATAAGACAGACCAGACCCCACACGACAAGCTATCAGACAGACCCCACACGACGAGCTATAAGACAGACGAGACCCCACACGACGAGCTATAAGACAGACTAGACCCCACACGACGAGCTATAAGACAGACTAGACCCCACACGACGAGCTATAAGACAGACTAGACCCCACACGACAAGCTATAAGACAGACTAGACCCCACACGACGAGCTATAAGACAGACTAGACCCCACACGACGAGCTATAAGACAGACTAGACCCCACACGACGAGCTATAAGACAGACTAGACCCCACACGACGAGCTATAAGACAGACTAGACCCCACACGACGAGCTATAAGACAGACTAGACCCCACGCGACGAGCTATAAGACAGACTAGACCCCACGCGACGAGCTATAAGACAGACTAGACCCCACAAGACGAGCTATAAGAGAGATGAGACCCCACACGACGAGCTATAAGAGAGATGAGACCCCACACGACGAGCTATAAGACAGACTAGACCCCACACGACGAGCTATAAGACAGACTAGACCCCACACGACGAGCTATAAGACAGACCAGACCCCACACGACCAGCTATAAGACAGACCAGACCCCACACGACGAGCTATCAGACAGACCCCACACGACGAGCTATAAGACAGACGAGACCCCACACGACGAGCTATAAGACAGACGAGACCCCACACGACGAGCTATAAGACAGACGAGACCACACACGACGAGCTATAAGACAGACCAGACCCCACACGACCAGCTATAAGACAGACCAGACCCCACACGACGAGCTATCAGACAGACCCCACACGACGAGCTATAAGACAGACGAGACCCCACACGACGAGCTATAAGACAGACGAGACCACACACGACGAGCTATAAGACAGACGAGACCCCACACGACGAGCTATAAGACAGACTAGACCCCACACGACGAGCTATAAGACAGACTAGACCCCACACGACGAGCTATAAGACAGACTAGACCCCACACGACCAGCTATAAGACAGACTAGACCCCACACGACGAGCTATAAGACAGACTAGACCCCACACGACGAGCTATAAGACAGACTAGACCCCACACGACGAGCTATAAGACAGACTAGACCCCACACGACGAGCTATAAGACAGACTAGACCCCACACGACGAGCTATAAGACAGACTAGACCCCACACGACGA

Function

GO:

id name namespace
GO:0006457 protein folding biological_process
GO:0005509 calcium ion binding molecular_function

KEGG:

id description
K09575 FKBP9_10; FK506-binding protein 9/10

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU2625114 lncRNA upstream 12201 10326934 ~ 10392171 (+) True G2295009
TU2625115 lncRNA upstream 40896 10327526 ~ 10363476 (+) True G2295010
TU2625077 lncRNA upstream 60239 10311406 ~ 10344133 (+) True G2294998
TU2625076 lncRNA upstream 60368 10311406 ~ 10344004 (+) False G2294998
TU2625101 lncRNA upstream 80784 10318805 ~ 10323588 (+) False LOC118946540
TU2625149 lncRNA downstream 3077 10430681 ~ 10431656 (+) False G2295030
TU2625150 lncRNA downstream 3077 10430681 ~ 10431656 (+) False G2295030
TU2625155 lncRNA downstream 3077 10430681 ~ 10441771 (+) False G2295030
TU2625158 lncRNA downstream 3077 10430681 ~ 10492480 (+) False G2295030
TU2625198 lncRNA downstream 13032 10440636 ~ 10441413 (+) True si:ch211-199g17.9
XM_036971831.1 mRNA upstream 81650 10322033 ~ 10322722 (+) False LOC118946540
XR_005041414.1 mRNA upstream 311844 10091303 ~ 10092528 (+) True LOC118946535
XM_021559811.2 mRNA upstream 340346 10049196 ~ 10064026 (+) False LOC110487893
XM_021559812.2 mRNA upstream 340346 10049197 ~ 10064026 (+) True LOC110487893
XM_036971715.1 mRNA upstream 779677 9622027 ~ 9624695 (+) True LOC110487884
XM_021562146.2 mRNA downstream 10073 10437677 ~ 10441669 (+) False si:ch211-199g17.9
XM_036971832.1 mRNA downstream 38761 10466365 ~ 10490055 (+) True LOC110489372
XM_036971644.1 mRNA downstream 79489 10507093 ~ 10509282 (+) True LOC110489373
XM_021559822.2 mRNA downstream 81860 10509464 ~ 10521398 (+) False LOC110487904
XM_021559821.2 mRNA downstream 87305 10514909 ~ 10521398 (+) False LOC110487904
TU2625098 other upstream 80784 10318852 ~ 10323588 (+) True LOC118946540
TU2624966 other upstream 272721 10130116 ~ 10131651 (+) False G2294925
TU2624382 other upstream 1066617 9335335 ~ 9337755 (+) True G2294452
TU2623927 other upstream 1301186 9094792 ~ 9103186 (+) True G2294081
TU2623755 other upstream 1557120 8844013 ~ 8847252 (+) False G2293943
TU2625227 other downstream 87350 10514954 ~ 10521307 (+) True LOC110487904
TU2626619 other downstream 857889 11285493 ~ 11290303 (+) True G2296150
TU2626760 other downstream 1135943 11563547 ~ 11564590 (+) True G2296278
TU2626940 other downstream 1479103 11906707 ~ 11908666 (+) False LOC110487932
TU2626989 other downstream 1487592 11915196 ~ 11918140 (+) False G2296450

Expression Profile