Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU2638596 |
| length | 293 |
| lncRNA type | sense_over |
| GC content | 0.49 |
| exon number | 3 |
| gene id | ccdc127b |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_050572.1 |
| NCBI id | CM025859.1 |
| chromosome length | 41837469 |
| location | 21203092 ~ 21205705 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU2638536 | lncRNA | upstream | 101543 | 21101312 ~ 21101602 (+) | True | G2306598 |
| TU2638468 | lncRNA | upstream | 164476 | 21038276 ~ 21038669 (+) | True | G2306530 |
| TU2638466 | lncRNA | upstream | 166058 | 21036767 ~ 21037087 (+) | True | G2306528 |
| TU2638128 | lncRNA | upstream | 320916 | 20881808 ~ 20882229 (+) | True | G2306214 |
| TU2638125 | lncRNA | upstream | 329644 | 20873279 ~ 20873501 (+) | True | G2306211 |
| TU2638587 | lncRNA | downstream | 8915 | 21214620 ~ 21214866 (+) | True | G2306646 |
| TU2638605 | lncRNA | downstream | 12502 | 21218207 ~ 21218410 (+) | True | G2306664 |
| TU2638609 | lncRNA | downstream | 27573 | 21233278 ~ 21238489 (+) | False | LOC110488070 |
| TU2638610 | lncRNA | downstream | 27573 | 21233278 ~ 21238489 (+) | False | LOC110488070 |
| TU2638611 | lncRNA | downstream | 27573 | 21233278 ~ 21238489 (+) | True | LOC110488070 |
| XR_005041417.1 | mRNA | upstream | 484053 | 20715069 ~ 20719092 (+) | False | LOC118946542 |
| XR_005041341.1 | mRNA | upstream | 1201771 | 19994142 ~ 20001374 (+) | True | LOC118946489 |
| XM_036971806.1 | mRNA | upstream | 1418706 | 19760234 ~ 19784439 (+) | True | ptk2aa |
| XM_036971420.1 | mRNA | downstream | 17216 | 21222921 ~ 21229758 (+) | False | LOC110488068 |
| XM_021560050.2 | mRNA | downstream | 17216 | 21222921 ~ 21231008 (+) | False | LOC110488068 |
| XM_021560051.2 | mRNA | downstream | 17216 | 21222921 ~ 21231008 (+) | True | LOC110488068 |
| XR_002468341.2 | mRNA | downstream | 27638 | 21233343 ~ 21238396 (+) | False | LOC110488070 |
| XM_036970584.1 | mRNA | downstream | 54554 | 21260259 ~ 21273307 (+) | False | slc9a1b |
| TU2638087 | other | upstream | 388847 | 20813189 ~ 20814298 (+) | True | G2306173 |
| TU2638086 | other | upstream | 388956 | 20813189 ~ 20814189 (+) | False | G2306173 |
| TU2637856 | other | upstream | 649461 | 20553333 ~ 20553684 (+) | True | G2305956 |
| TU2636452 | other | upstream | 1373184 | 19828217 ~ 19829961 (+) | True | G2304678 |
| TU2636184 | other | upstream | 1843356 | 19354211 ~ 19359789 (+) | True | dgat1a |
| TU2638628 | other | downstream | 101727 | 21307432 ~ 21311878 (+) | False | LOC110488072 |
| TU2638627 | other | downstream | 101853 | 21307558 ~ 21311807 (+) | True | LOC110488072 |
| TU2638636 | other | downstream | 114918 | 21320623 ~ 21323896 (+) | True | G2306688 |
| TU2638805 | other | downstream | 381383 | 21587088 ~ 21587434 (+) | True | G2306825 |
| TU2639980 | other | downstream | 1200312 | 22406017 ~ 22416292 (+) | True | c32h5orf49 |
