Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU2615720 |
| length | 250 |
| lncRNA type | inter_gene |
| GC content | 0.36 |
| exon number | 1 |
| gene id | G2287538 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_050572.1 |
| NCBI id | CM025859.1 |
| chromosome length | 41837469 |
| location | 689349 ~ 689598 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU2615714 | lncRNA | upstream | 38983 | 650106 ~ 650366 (+) | True | G2287532 |
| TU2615711 | lncRNA | upstream | 41856 | 646227 ~ 647493 (+) | True | G2287529 |
| TU2615710 | lncRNA | upstream | 46807 | 642273 ~ 642542 (+) | True | G2287528 |
| TU2615640 | lncRNA | upstream | 102194 | 585359 ~ 587155 (+) | True | seh1l |
| TU2615681 | lncRNA | upstream | 112228 | 576416 ~ 577121 (+) | True | G2287501 |
| TU2615721 | lncRNA | downstream | 443 | 690041 ~ 690241 (+) | True | G2287539 |
| TU2615724 | lncRNA | downstream | 7014 | 696612 ~ 696875 (+) | True | G2287542 |
| TU2615725 | lncRNA | downstream | 8638 | 698236 ~ 698502 (+) | True | G2287543 |
| TU2615735 | lncRNA | downstream | 16855 | 706453 ~ 707885 (+) | True | G2287545 |
| TU2615737 | lncRNA | downstream | 19907 | 709505 ~ 713676 (+) | True | G2287547 |
| XM_021559717.2 | mRNA | upstream | 72922 | 596762 ~ 616427 (+) | False | rnmt |
| XM_021559716.2 | mRNA | upstream | 72922 | 597285 ~ 616427 (+) | True | rnmt |
| XM_021559715.2 | mRNA | upstream | 102190 | 565124 ~ 587159 (+) | False | seh1l |
| XR_005041297.1 | mRNA | upstream | 102190 | 565124 ~ 587159 (+) | False | seh1l |
| XM_036971454.1 | mRNA | upstream | 207192 | 476242 ~ 482157 (+) | True | psmg2 |
| XM_036971021.1 | mRNA | downstream | 49023 | 738621 ~ 899937 (+) | True | rims2b |
| XM_021559723.2 | mRNA | downstream | 246724 | 936322 ~ 962116 (+) | False | LOC110487806 |
| XM_021559722.2 | mRNA | downstream | 246730 | 936328 ~ 962116 (+) | True | LOC110487806 |
| XM_036971390.1 | mRNA | downstream | 591335 | 1280933 ~ 1361298 (+) | True | ncaldb |
| XM_036971668.1 | mRNA | downstream | 910752 | 1600350 ~ 1639573 (+) | True | LOC110511936 |
| TU2615649 | other | upstream | 201688 | 486793 ~ 487661 (+) | True | G2287470 |
| TU2615648 | other | upstream | 201798 | 486793 ~ 487551 (+) | False | G2287470 |
| TU2615647 | other | upstream | 201867 | 486793 ~ 487482 (+) | False | G2287470 |
| TU2615646 | other | upstream | 201958 | 486793 ~ 487391 (+) | False | G2287470 |
| TU2615343 | other | upstream | 448709 | 233742 ~ 240640 (+) | True | rpl30 |
| TU2616270 | other | downstream | 583776 | 1273374 ~ 1274170 (+) | True | G2287973 |
| TU2617170 | other | downstream | 1519524 | 2209122 ~ 2255073 (+) | False | triqk |
| TU2617169 | other | downstream | 1519850 | 2209448 ~ 2255073 (+) | False | triqk |
| TU2617171 | other | downstream | 1519850 | 2209448 ~ 2255073 (+) | True | triqk |
| TU2617238 | other | downstream | 1632276 | 2321874 ~ 2324182 (+) | True | G2288669 |
