Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU2616175 |
| length | 1202 |
| lncRNA type | inter_gene |
| GC content | 0.46 |
| exon number | 2 |
| gene id | G2287932 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_050572.1 |
| NCBI id | CM025859.1 |
| chromosome length | 41837469 |
| location | 1044306 ~ 1057024 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU2616170 | lncRNA | upstream | 1701 | 1042103 ~ 1042605 (+) | True | G2287930 |
| TU2616142 | lncRNA | upstream | 30906 | 1013075 ~ 1013400 (+) | True | G2287905 |
| TU2616082 | lncRNA | upstream | 72810 | 971082 ~ 971496 (+) | True | G2287845 |
| TU2615790 | lncRNA | upstream | 211464 | 817232 ~ 832842 (+) | True | G2287597 |
| TU2615738 | lncRNA | upstream | 321614 | 720705 ~ 722692 (+) | True | G2287548 |
| TU2616182 | lncRNA | downstream | 7067 | 1064091 ~ 1084625 (+) | False | G2287935 |
| TU2616183 | lncRNA | downstream | 7067 | 1064091 ~ 1084625 (+) | False | G2287935 |
| TU2616184 | lncRNA | downstream | 7067 | 1064091 ~ 1084403 (+) | False | G2287935 |
| TU2616186 | lncRNA | downstream | 17144 | 1074168 ~ 1084403 (+) | True | G2287935 |
| TU2616187 | lncRNA | downstream | 29339 | 1086363 ~ 1087124 (+) | False | G2287936 |
| XM_021559723.2 | mRNA | upstream | 82190 | 936322 ~ 962116 (+) | False | LOC110487806 |
| XM_021559722.2 | mRNA | upstream | 82190 | 936328 ~ 962116 (+) | True | LOC110487806 |
| XM_036971021.1 | mRNA | upstream | 144369 | 738621 ~ 899937 (+) | True | rims2b |
| XM_021559717.2 | mRNA | upstream | 427879 | 596762 ~ 616427 (+) | False | rnmt |
| XM_036971390.1 | mRNA | downstream | 223909 | 1280933 ~ 1361298 (+) | True | ncaldb |
| XM_036971668.1 | mRNA | downstream | 543326 | 1600350 ~ 1639573 (+) | True | LOC110511936 |
| XM_036970971.1 | mRNA | downstream | 654531 | 1711555 ~ 1825118 (+) | False | fam91a1 |
| XM_036970972.1 | mRNA | downstream | 654531 | 1711555 ~ 1825118 (+) | True | fam91a1 |
| XM_021559728.2 | mRNA | downstream | 792436 | 1849460 ~ 1851250 (+) | True | lratd2a |
| TU2615649 | other | upstream | 556645 | 486793 ~ 487661 (+) | True | G2287470 |
| TU2615648 | other | upstream | 556755 | 486793 ~ 487551 (+) | False | G2287470 |
| TU2615647 | other | upstream | 556824 | 486793 ~ 487482 (+) | False | G2287470 |
| TU2615646 | other | upstream | 556915 | 486793 ~ 487391 (+) | False | G2287470 |
| TU2615343 | other | upstream | 803666 | 233742 ~ 240640 (+) | True | rpl30 |
| TU2616270 | other | downstream | 216350 | 1273374 ~ 1274170 (+) | True | G2287973 |
| TU2617170 | other | downstream | 1152098 | 2209122 ~ 2255073 (+) | False | triqk |
| TU2617169 | other | downstream | 1152424 | 2209448 ~ 2255073 (+) | False | triqk |
| TU2617171 | other | downstream | 1152424 | 2209448 ~ 2255073 (+) | True | triqk |
| TU2617238 | other | downstream | 1264850 | 2321874 ~ 2324182 (+) | True | G2288669 |
