Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU2616532 |
| length | 284 |
| lncRNA type | inter_gene |
| GC content | 0.45 |
| exon number | 1 |
| gene id | G2288175 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_050572.1 |
| NCBI id | CM025859.1 |
| chromosome length | 41837469 |
| location | 1496107 ~ 1496390 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU2616521 | lncRNA | upstream | 4945 | 1489692 ~ 1491162 (+) | True | G2288169 |
| TU2616506 | lncRNA | upstream | 23938 | 1471965 ~ 1472169 (+) | True | G2288159 |
| TU2616425 | lncRNA | upstream | 24450 | 1471443 ~ 1471657 (+) | True | G2288090 |
| TU2616405 | lncRNA | upstream | 53419 | 1441921 ~ 1442688 (+) | True | G2288073 |
| TU2616373 | lncRNA | upstream | 96158 | 1395470 ~ 1399949 (+) | True | G2288042 |
| TU2616547 | lncRNA | downstream | 11471 | 1507861 ~ 1523487 (+) | False | G2288190 |
| TU2616551 | lncRNA | downstream | 11471 | 1507861 ~ 1536232 (+) | False | G2288190 |
| TU2616561 | lncRNA | downstream | 23028 | 1519418 ~ 1550796 (+) | True | G2288195 |
| TU2616552 | lncRNA | downstream | 25169 | 1521559 ~ 1556943 (+) | True | G2288190 |
| TU2616558 | lncRNA | downstream | 40960 | 1537350 ~ 1561122 (+) | False | G2288193 |
| XM_036971390.1 | mRNA | upstream | 134809 | 1280933 ~ 1361298 (+) | True | ncaldb |
| XM_021559723.2 | mRNA | upstream | 533991 | 936322 ~ 962116 (+) | False | LOC110487806 |
| XM_021559722.2 | mRNA | upstream | 533991 | 936328 ~ 962116 (+) | True | LOC110487806 |
| XM_036971021.1 | mRNA | upstream | 596170 | 738621 ~ 899937 (+) | True | rims2b |
| XM_021559716.2 | mRNA | upstream | 879680 | 597285 ~ 616427 (+) | True | rnmt |
| XM_036971668.1 | mRNA | downstream | 103960 | 1600350 ~ 1639573 (+) | True | LOC110511936 |
| XM_036970971.1 | mRNA | downstream | 215165 | 1711555 ~ 1825118 (+) | False | fam91a1 |
| XM_036970972.1 | mRNA | downstream | 215165 | 1711555 ~ 1825118 (+) | True | fam91a1 |
| XM_021559728.2 | mRNA | downstream | 353070 | 1849460 ~ 1851250 (+) | True | lratd2a |
| XM_036971822.1 | mRNA | downstream | 396200 | 1892590 ~ 1893952 (+) | True | LOC118946536 |
| TU2616270 | other | upstream | 221937 | 1273374 ~ 1274170 (+) | True | G2287973 |
| TU2615649 | other | upstream | 1008446 | 486793 ~ 487661 (+) | True | G2287470 |
| TU2615648 | other | upstream | 1008556 | 486793 ~ 487551 (+) | False | G2287470 |
| TU2615647 | other | upstream | 1008625 | 486793 ~ 487482 (+) | False | G2287470 |
| TU2615646 | other | upstream | 1008716 | 486793 ~ 487391 (+) | False | G2287470 |
| TU2617170 | other | downstream | 712732 | 2209122 ~ 2255073 (+) | False | triqk |
| TU2617169 | other | downstream | 713058 | 2209448 ~ 2255073 (+) | False | triqk |
| TU2617171 | other | downstream | 713058 | 2209448 ~ 2255073 (+) | True | triqk |
| TU2617238 | other | downstream | 825484 | 2321874 ~ 2324182 (+) | True | G2288669 |
| TU2617423 | other | downstream | 884057 | 2380447 ~ 2381395 (+) | True | G2288814 |
