Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU2616552 |
| length | 748 |
| lncRNA type | inter_gene |
| GC content | 0.37 |
| exon number | 3 |
| gene id | G2288190 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_050572.1 |
| NCBI id | CM025859.1 |
| chromosome length | 41837469 |
| location | 1507861 ~ 1556943 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU2616532 | lncRNA | upstream | 25169 | 1496107 ~ 1496390 (+) | True | G2288175 |
| TU2616521 | lncRNA | upstream | 30397 | 1489692 ~ 1491162 (+) | True | G2288169 |
| TU2616506 | lncRNA | upstream | 49390 | 1471965 ~ 1472169 (+) | True | G2288159 |
| TU2616425 | lncRNA | upstream | 49902 | 1471443 ~ 1471657 (+) | True | G2288090 |
| TU2616405 | lncRNA | upstream | 78871 | 1441921 ~ 1442688 (+) | True | G2288073 |
| TU2616621 | lncRNA | downstream | 24010 | 1580953 ~ 1581253 (+) | True | G2288214 |
| TU2616622 | lncRNA | downstream | 33393 | 1590336 ~ 1590632 (+) | True | G2288215 |
| TU2616624 | lncRNA | downstream | 39732 | 1596675 ~ 1597150 (+) | True | G2288217 |
| TU2616652 | lncRNA | downstream | 90687 | 1647630 ~ 1647834 (+) | True | G2288233 |
| TU2616660 | lncRNA | downstream | 96625 | 1653568 ~ 1659725 (+) | True | G2288239 |
| XM_036971390.1 | mRNA | upstream | 160261 | 1280933 ~ 1361298 (+) | True | ncaldb |
| XM_021559723.2 | mRNA | upstream | 559443 | 936322 ~ 962116 (+) | False | LOC110487806 |
| XM_021559722.2 | mRNA | upstream | 559443 | 936328 ~ 962116 (+) | True | LOC110487806 |
| XM_036971021.1 | mRNA | upstream | 621622 | 738621 ~ 899937 (+) | True | rims2b |
| XM_021559716.2 | mRNA | upstream | 905132 | 597285 ~ 616427 (+) | True | rnmt |
| XM_036971668.1 | mRNA | downstream | 43407 | 1600350 ~ 1639573 (+) | True | LOC110511936 |
| XM_036970971.1 | mRNA | downstream | 154612 | 1711555 ~ 1825118 (+) | False | fam91a1 |
| XM_036970972.1 | mRNA | downstream | 154612 | 1711555 ~ 1825118 (+) | True | fam91a1 |
| XM_021559728.2 | mRNA | downstream | 292517 | 1849460 ~ 1851250 (+) | True | lratd2a |
| XM_036971822.1 | mRNA | downstream | 335647 | 1892590 ~ 1893952 (+) | True | LOC118946536 |
| TU2616270 | other | upstream | 247389 | 1273374 ~ 1274170 (+) | True | G2287973 |
| TU2615649 | other | upstream | 1033898 | 486793 ~ 487661 (+) | True | G2287470 |
| TU2615648 | other | upstream | 1034008 | 486793 ~ 487551 (+) | False | G2287470 |
| TU2615647 | other | upstream | 1034077 | 486793 ~ 487482 (+) | False | G2287470 |
| TU2615646 | other | upstream | 1034168 | 486793 ~ 487391 (+) | False | G2287470 |
| TU2617170 | other | downstream | 652179 | 2209122 ~ 2255073 (+) | False | triqk |
| TU2617169 | other | downstream | 652505 | 2209448 ~ 2255073 (+) | False | triqk |
| TU2617171 | other | downstream | 652505 | 2209448 ~ 2255073 (+) | True | triqk |
| TU2617238 | other | downstream | 764931 | 2321874 ~ 2324182 (+) | True | G2288669 |
| TU2617423 | other | downstream | 823504 | 2380447 ~ 2381395 (+) | True | G2288814 |
