Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU2616561 |
| length | 1203 |
| lncRNA type | inter_gene |
| GC content | 0.35 |
| exon number | 3 |
| gene id | G2288195 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_050572.1 |
| NCBI id | CM025859.1 |
| chromosome length | 41837469 |
| location | 1519418 ~ 1550796 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU2616532 | lncRNA | upstream | 23028 | 1496107 ~ 1496390 (+) | True | G2288175 |
| TU2616521 | lncRNA | upstream | 28256 | 1489692 ~ 1491162 (+) | True | G2288169 |
| TU2616506 | lncRNA | upstream | 47249 | 1471965 ~ 1472169 (+) | True | G2288159 |
| TU2616425 | lncRNA | upstream | 47761 | 1471443 ~ 1471657 (+) | True | G2288090 |
| TU2616405 | lncRNA | upstream | 76730 | 1441921 ~ 1442688 (+) | True | G2288073 |
| TU2616569 | lncRNA | downstream | 5302 | 1556098 ~ 1557162 (+) | False | G2288202 |
| TU2616570 | lncRNA | downstream | 5302 | 1556098 ~ 1563194 (+) | True | G2288202 |
| TU2616621 | lncRNA | downstream | 30157 | 1580953 ~ 1581253 (+) | True | G2288214 |
| TU2616622 | lncRNA | downstream | 39540 | 1590336 ~ 1590632 (+) | True | G2288215 |
| TU2616624 | lncRNA | downstream | 45879 | 1596675 ~ 1597150 (+) | True | G2288217 |
| XM_036971390.1 | mRNA | upstream | 158120 | 1280933 ~ 1361298 (+) | True | ncaldb |
| XM_021559723.2 | mRNA | upstream | 557302 | 936322 ~ 962116 (+) | False | LOC110487806 |
| XM_021559722.2 | mRNA | upstream | 557302 | 936328 ~ 962116 (+) | True | LOC110487806 |
| XM_036971021.1 | mRNA | upstream | 619481 | 738621 ~ 899937 (+) | True | rims2b |
| XM_021559716.2 | mRNA | upstream | 902991 | 597285 ~ 616427 (+) | True | rnmt |
| XM_036971668.1 | mRNA | downstream | 49554 | 1600350 ~ 1639573 (+) | True | LOC110511936 |
| XM_036970971.1 | mRNA | downstream | 160759 | 1711555 ~ 1825118 (+) | False | fam91a1 |
| XM_036970972.1 | mRNA | downstream | 160759 | 1711555 ~ 1825118 (+) | True | fam91a1 |
| XM_021559728.2 | mRNA | downstream | 298664 | 1849460 ~ 1851250 (+) | True | lratd2a |
| XM_036971822.1 | mRNA | downstream | 341794 | 1892590 ~ 1893952 (+) | True | LOC118946536 |
| TU2616270 | other | upstream | 245248 | 1273374 ~ 1274170 (+) | True | G2287973 |
| TU2615649 | other | upstream | 1031757 | 486793 ~ 487661 (+) | True | G2287470 |
| TU2615648 | other | upstream | 1031867 | 486793 ~ 487551 (+) | False | G2287470 |
| TU2615647 | other | upstream | 1031936 | 486793 ~ 487482 (+) | False | G2287470 |
| TU2615646 | other | upstream | 1032027 | 486793 ~ 487391 (+) | False | G2287470 |
| TU2617170 | other | downstream | 658326 | 2209122 ~ 2255073 (+) | False | triqk |
| TU2617169 | other | downstream | 658652 | 2209448 ~ 2255073 (+) | False | triqk |
| TU2617171 | other | downstream | 658652 | 2209448 ~ 2255073 (+) | True | triqk |
| TU2617238 | other | downstream | 771078 | 2321874 ~ 2324182 (+) | True | G2288669 |
| TU2617423 | other | downstream | 829651 | 2380447 ~ 2381395 (+) | True | G2288814 |
