Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU2616558 |
| length | 1098 |
| lncRNA type | inter_gene |
| GC content | 0.34 |
| exon number | 3 |
| gene id | G2288193 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_050572.1 |
| NCBI id | CM025859.1 |
| chromosome length | 41837469 |
| location | 1537350 ~ 1561122 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU2616551 | lncRNA | upstream | 1118 | 1507861 ~ 1536232 (+) | False | G2288190 |
| TU2616547 | lncRNA | upstream | 13863 | 1507861 ~ 1523487 (+) | False | G2288190 |
| TU2616532 | lncRNA | upstream | 40960 | 1496107 ~ 1496390 (+) | True | G2288175 |
| TU2616521 | lncRNA | upstream | 46188 | 1489692 ~ 1491162 (+) | True | G2288169 |
| TU2616506 | lncRNA | upstream | 65181 | 1471965 ~ 1472169 (+) | True | G2288159 |
| TU2616621 | lncRNA | downstream | 19831 | 1580953 ~ 1581253 (+) | True | G2288214 |
| TU2616622 | lncRNA | downstream | 29214 | 1590336 ~ 1590632 (+) | True | G2288215 |
| TU2616624 | lncRNA | downstream | 35553 | 1596675 ~ 1597150 (+) | True | G2288217 |
| TU2616652 | lncRNA | downstream | 86508 | 1647630 ~ 1647834 (+) | True | G2288233 |
| TU2616660 | lncRNA | downstream | 92446 | 1653568 ~ 1659725 (+) | True | G2288239 |
| XM_036971390.1 | mRNA | upstream | 176052 | 1280933 ~ 1361298 (+) | True | ncaldb |
| XM_021559723.2 | mRNA | upstream | 575234 | 936322 ~ 962116 (+) | False | LOC110487806 |
| XM_021559722.2 | mRNA | upstream | 575234 | 936328 ~ 962116 (+) | True | LOC110487806 |
| XM_036971021.1 | mRNA | upstream | 637413 | 738621 ~ 899937 (+) | True | rims2b |
| XM_021559716.2 | mRNA | upstream | 920923 | 597285 ~ 616427 (+) | True | rnmt |
| XM_036971668.1 | mRNA | downstream | 39228 | 1600350 ~ 1639573 (+) | True | LOC110511936 |
| XM_036970971.1 | mRNA | downstream | 150433 | 1711555 ~ 1825118 (+) | False | fam91a1 |
| XM_036970972.1 | mRNA | downstream | 150433 | 1711555 ~ 1825118 (+) | True | fam91a1 |
| XM_021559728.2 | mRNA | downstream | 288338 | 1849460 ~ 1851250 (+) | True | lratd2a |
| XM_036971822.1 | mRNA | downstream | 331468 | 1892590 ~ 1893952 (+) | True | LOC118946536 |
| TU2616270 | other | upstream | 263180 | 1273374 ~ 1274170 (+) | True | G2287973 |
| TU2615649 | other | upstream | 1049689 | 486793 ~ 487661 (+) | True | G2287470 |
| TU2615648 | other | upstream | 1049799 | 486793 ~ 487551 (+) | False | G2287470 |
| TU2615647 | other | upstream | 1049868 | 486793 ~ 487482 (+) | False | G2287470 |
| TU2615646 | other | upstream | 1049959 | 486793 ~ 487391 (+) | False | G2287470 |
| TU2617170 | other | downstream | 648000 | 2209122 ~ 2255073 (+) | False | triqk |
| TU2617169 | other | downstream | 648326 | 2209448 ~ 2255073 (+) | False | triqk |
| TU2617171 | other | downstream | 648326 | 2209448 ~ 2255073 (+) | True | triqk |
| TU2617238 | other | downstream | 760752 | 2321874 ~ 2324182 (+) | True | G2288669 |
| TU2617423 | other | downstream | 819325 | 2380447 ~ 2381395 (+) | True | G2288814 |
