Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU2616559 |
| length | 405 |
| lncRNA type | inter_gene |
| GC content | 0.35 |
| exon number | 2 |
| gene id | G2288193 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_050572.1 |
| NCBI id | CM025859.1 |
| chromosome length | 41837469 |
| location | 1537350 ~ 1561122 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU2616551 | lncRNA | upstream | 1118 | 1507861 ~ 1536232 (+) | False | G2288190 |
| TU2616547 | lncRNA | upstream | 13863 | 1507861 ~ 1523487 (+) | False | G2288190 |
| TU2616532 | lncRNA | upstream | 40960 | 1496107 ~ 1496390 (+) | True | G2288175 |
| TU2616521 | lncRNA | upstream | 46188 | 1489692 ~ 1491162 (+) | True | G2288169 |
| TU2616506 | lncRNA | upstream | 65181 | 1471965 ~ 1472169 (+) | True | G2288159 |
| TU2616555 | lncRNA | downstream | 1372 | 1540823 ~ 1563864 (+) | False | G2288192 |
| TU2616568 | lncRNA | downstream | 7652 | 1547103 ~ 1548596 (+) | True | G2288201 |
| TU2616556 | lncRNA | downstream | 10991 | 1550442 ~ 1553389 (+) | True | G2288192 |
| TU2616569 | lncRNA | downstream | 16647 | 1556098 ~ 1557162 (+) | False | G2288202 |
| TU2616570 | lncRNA | downstream | 16647 | 1556098 ~ 1563194 (+) | True | G2288202 |
| XM_036971390.1 | mRNA | upstream | 176052 | 1280933 ~ 1361298 (+) | True | ncaldb |
| XM_021559723.2 | mRNA | upstream | 575234 | 936322 ~ 962116 (+) | False | LOC110487806 |
| XM_021559722.2 | mRNA | upstream | 575234 | 936328 ~ 962116 (+) | True | LOC110487806 |
| XM_036971021.1 | mRNA | upstream | 637413 | 738621 ~ 899937 (+) | True | rims2b |
| XM_021559716.2 | mRNA | upstream | 920923 | 597285 ~ 616427 (+) | True | rnmt |
| XM_036971668.1 | mRNA | downstream | 60899 | 1600350 ~ 1639573 (+) | True | LOC110511936 |
| XM_036970971.1 | mRNA | downstream | 172104 | 1711555 ~ 1825118 (+) | False | fam91a1 |
| XM_036970972.1 | mRNA | downstream | 172104 | 1711555 ~ 1825118 (+) | True | fam91a1 |
| XM_021559728.2 | mRNA | downstream | 310009 | 1849460 ~ 1851250 (+) | True | lratd2a |
| XM_036971822.1 | mRNA | downstream | 353139 | 1892590 ~ 1893952 (+) | True | LOC118946536 |
| TU2616270 | other | upstream | 263180 | 1273374 ~ 1274170 (+) | True | G2287973 |
| TU2615649 | other | upstream | 1049689 | 486793 ~ 487661 (+) | True | G2287470 |
| TU2615648 | other | upstream | 1049799 | 486793 ~ 487551 (+) | False | G2287470 |
| TU2615647 | other | upstream | 1049868 | 486793 ~ 487482 (+) | False | G2287470 |
| TU2615646 | other | upstream | 1049959 | 486793 ~ 487391 (+) | False | G2287470 |
| TU2617170 | other | downstream | 669671 | 2209122 ~ 2255073 (+) | False | triqk |
| TU2617169 | other | downstream | 669997 | 2209448 ~ 2255073 (+) | False | triqk |
| TU2617171 | other | downstream | 669997 | 2209448 ~ 2255073 (+) | True | triqk |
| TU2617238 | other | downstream | 782423 | 2321874 ~ 2324182 (+) | True | G2288669 |
| TU2617423 | other | downstream | 840996 | 2380447 ~ 2381395 (+) | True | G2288814 |
