Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU2616568 |
| length | 258 |
| lncRNA type | inter_gene |
| GC content | 0.33 |
| exon number | 2 |
| gene id | G2288201 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_050572.1 |
| NCBI id | CM025859.1 |
| chromosome length | 41837469 |
| location | 1547103 ~ 1548596 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU2616559 | lncRNA | upstream | 7652 | 1537350 ~ 1539451 (+) | True | G2288193 |
| TU2616551 | lncRNA | upstream | 10871 | 1507861 ~ 1536232 (+) | False | G2288190 |
| TU2616547 | lncRNA | upstream | 23616 | 1507861 ~ 1523487 (+) | False | G2288190 |
| TU2616532 | lncRNA | upstream | 50713 | 1496107 ~ 1496390 (+) | True | G2288175 |
| TU2616521 | lncRNA | upstream | 55941 | 1489692 ~ 1491162 (+) | True | G2288169 |
| TU2616556 | lncRNA | downstream | 1846 | 1550442 ~ 1553389 (+) | True | G2288192 |
| TU2616569 | lncRNA | downstream | 7502 | 1556098 ~ 1557162 (+) | False | G2288202 |
| TU2616570 | lncRNA | downstream | 7502 | 1556098 ~ 1563194 (+) | True | G2288202 |
| TU2616621 | lncRNA | downstream | 32357 | 1580953 ~ 1581253 (+) | True | G2288214 |
| TU2616622 | lncRNA | downstream | 41740 | 1590336 ~ 1590632 (+) | True | G2288215 |
| XM_036971390.1 | mRNA | upstream | 185805 | 1280933 ~ 1361298 (+) | True | ncaldb |
| XM_021559723.2 | mRNA | upstream | 584987 | 936322 ~ 962116 (+) | False | LOC110487806 |
| XM_021559722.2 | mRNA | upstream | 584987 | 936328 ~ 962116 (+) | True | LOC110487806 |
| XM_036971021.1 | mRNA | upstream | 647166 | 738621 ~ 899937 (+) | True | rims2b |
| XM_021559716.2 | mRNA | upstream | 930676 | 597285 ~ 616427 (+) | True | rnmt |
| XM_036971668.1 | mRNA | downstream | 51754 | 1600350 ~ 1639573 (+) | True | LOC110511936 |
| XM_036970971.1 | mRNA | downstream | 162959 | 1711555 ~ 1825118 (+) | False | fam91a1 |
| XM_036970972.1 | mRNA | downstream | 162959 | 1711555 ~ 1825118 (+) | True | fam91a1 |
| XM_021559728.2 | mRNA | downstream | 300864 | 1849460 ~ 1851250 (+) | True | lratd2a |
| XM_036971822.1 | mRNA | downstream | 343994 | 1892590 ~ 1893952 (+) | True | LOC118946536 |
| TU2616270 | other | upstream | 272933 | 1273374 ~ 1274170 (+) | True | G2287973 |
| TU2615649 | other | upstream | 1059442 | 486793 ~ 487661 (+) | True | G2287470 |
| TU2615648 | other | upstream | 1059552 | 486793 ~ 487551 (+) | False | G2287470 |
| TU2615647 | other | upstream | 1059621 | 486793 ~ 487482 (+) | False | G2287470 |
| TU2615646 | other | upstream | 1059712 | 486793 ~ 487391 (+) | False | G2287470 |
| TU2617170 | other | downstream | 660526 | 2209122 ~ 2255073 (+) | False | triqk |
| TU2617169 | other | downstream | 660852 | 2209448 ~ 2255073 (+) | False | triqk |
| TU2617171 | other | downstream | 660852 | 2209448 ~ 2255073 (+) | True | triqk |
| TU2617238 | other | downstream | 773278 | 2321874 ~ 2324182 (+) | True | G2288669 |
| TU2617423 | other | downstream | 831851 | 2380447 ~ 2381395 (+) | True | G2288814 |
