Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU2618219 |
| length | 285 |
| lncRNA type | inter_gene |
| GC content | 0.46 |
| exon number | 1 |
| gene id | G2289464 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_050572.1 |
| NCBI id | CM025859.1 |
| chromosome length | 41837469 |
| location | 3349944 ~ 3350228 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU2618218 | lncRNA | upstream | 7383 | 3342313 ~ 3342561 (+) | True | G2289463 |
| TU2618217 | lncRNA | upstream | 11041 | 3338660 ~ 3338903 (+) | True | G2289462 |
| TU2618213 | lncRNA | upstream | 23953 | 3325034 ~ 3325991 (+) | True | G2289458 |
| TU2618212 | lncRNA | upstream | 25988 | 3323089 ~ 3323956 (+) | False | G2289457 |
| TU2618211 | lncRNA | upstream | 25988 | 3323179 ~ 3323956 (+) | True | G2289457 |
| TU2618274 | lncRNA | downstream | 30087 | 3380315 ~ 3380538 (+) | True | G2289509 |
| TU2618305 | lncRNA | downstream | 66777 | 3417005 ~ 3417297 (+) | True | G2289537 |
| TU2618306 | lncRNA | downstream | 67189 | 3417417 ~ 3417617 (+) | True | G2289538 |
| TU2618307 | lncRNA | downstream | 67691 | 3417919 ~ 3418934 (+) | True | G2289539 |
| TU2618314 | lncRNA | downstream | 92643 | 3442871 ~ 3443465 (+) | True | G2289546 |
| XM_036971823.1 | mRNA | upstream | 168144 | 3160218 ~ 3181800 (+) | True | LOC118946537 |
| XM_036971624.1 | mRNA | upstream | 357856 | 2930144 ~ 2992088 (+) | True | angpt2b |
| XM_021559742.2 | mRNA | upstream | 463160 | 2883928 ~ 2886784 (+) | True | LOC110487826 |
| XM_021559739.2 | mRNA | upstream | 504378 | 2816484 ~ 2845566 (+) | True | LOC110487823 |
| XM_021559740.2 | mRNA | upstream | 506066 | 2816476 ~ 2843878 (+) | False | LOC110487823 |
| XM_021559746.2 | mRNA | downstream | 1652750 | 5002978 ~ 5011804 (+) | True | pef1 |
| XM_036971384.1 | mRNA | downstream | 1664321 | 5014549 ~ 5017948 (+) | False | smim12 |
| XM_036970898.1 | mRNA | downstream | 1945581 | 5295809 ~ 5412625 (+) | False | dlgap3 |
| XM_036971692.1 | mRNA | downstream | 2158773 | 5509001 ~ 5525069 (+) | False | LOC110513117 |
| XM_036971693.1 | mRNA | downstream | 2158773 | 5509001 ~ 5525069 (+) | True | LOC110513117 |
| TU2618062 | other | upstream | 289165 | 3060442 ~ 3060779 (+) | True | G2289325 |
| TU2617423 | other | upstream | 968549 | 2380447 ~ 2381395 (+) | True | G2288814 |
| TU2617238 | other | upstream | 1025762 | 2321874 ~ 2324182 (+) | True | G2288669 |
| TU2617169 | other | upstream | 1094871 | 2209448 ~ 2255073 (+) | False | triqk |
| TU2619328 | other | downstream | 1098661 | 4448889 ~ 4449571 (+) | True | G2290395 |
| TU2619392 | other | downstream | 1196676 | 4546904 ~ 4548603 (+) | False | G2290455 |
| TU2619393 | other | downstream | 1196676 | 4546904 ~ 4548844 (+) | False | G2290455 |
| TU2619394 | other | downstream | 1196676 | 4546904 ~ 4548844 (+) | True | G2290455 |
| TU2619856 | other | downstream | 1664428 | 5014656 ~ 5018314 (+) | True | smim12 |
