RNA id: TU2624338


Basic Information

Item Value
RNA id TU2624338
length 206
lncRNA type inter_gene
GC content 0.39
exon number 1
gene id G2294412
representative True

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 9251547 ~ 9251752 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

CTGGTCTAATGTACATTTAGCTAGAAAAGGGTTTTATTCACTCTGGGAAGAGGGGGCATTCTATGACTTTGACATAACATCTGTGTAACGGggttcttcctgggaaggagaggtggaccaaaatgcagcgtggttataattcatggttctttaataaagaaactatacatgaataaactacaaaaacaagcaacgtgaaaacccga

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU2624336 lncRNA upstream 262 9251070 ~ 9251285 (+) True G2294410
TU2623858 lncRNA upstream 88606 9161386 ~ 9162941 (+) False LOC110489366
TU2624348 lncRNA downstream 15004 9266756 ~ 9268052 (+) True G2294421
TU2624375 lncRNA downstream 75698 9327450 ~ 9328654 (+) True G2294448
TU2624377 lncRNA downstream 78507 9330259 ~ 9330708 (+) True G2294449
TU2624388 lncRNA downstream 93009 9344761 ~ 9345078 (+) True G2294457
TU2624389 lncRNA downstream 95066 9346818 ~ 9347314 (+) True G2294458
XM_036970789.1 mRNA upstream 89051 9046596 ~ 9162496 (+) False LOC110489366
XM_036971827.1 mRNA downstream 72588 9324340 ~ 9325002 (+) True LOC118946539
trnap-agg-161 mRNA downstream 102065 9353817 ~ 9353888 (+) True trnap-agg-161
trnap-agg-163 mRNA downstream 105339 9357091 ~ 9357162 (+) True trnap-agg-163
trnap-agg-165 mRNA downstream 111297 9363049 ~ 9363120 (+) True trnap-agg-165
trnap-agg-167 mRNA downstream 114571 9366323 ~ 9366394 (+) True trnap-agg-167
TU2623927 other upstream 148361 9094792 ~ 9103186 (+) True G2294081
TU2623755 other upstream 404295 8844013 ~ 8847252 (+) False G2293943
TU2623757 other upstream 404295 8844013 ~ 8847252 (+) True G2293943
TU2623742 other upstream 456045 8791101 ~ 8795502 (+) False G2293942
TU2624382 other downstream 83583 9335335 ~ 9337755 (+) True G2294452
TU2624966 other downstream 878364 10130116 ~ 10131651 (+) False G2294925
TU2625098 other downstream 1067100 10318852 ~ 10323588 (+) True LOC118946540
TU2625227 other downstream 1263202 10514954 ~ 10521307 (+) True LOC110487904
TU2626619 other downstream 2033741 11285493 ~ 11290303 (+) True G2296150

Expression Profile