RNA id: TU2626137


Basic Information

Item Value
RNA id TU2626137
length 293
lncRNA type antisense_over
GC content 0.50
exon number 2
gene id G2295760
representative True

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 10891529 ~ 10899925 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

cacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacactcagacacacacacacacacacacacacacacactcagacacactcagacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacactcagacacacacacacacacacacacactcagacacacacacacacacacacacactcagacacacaatcacacacacacacacacacacacac

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU2626068 lncRNA upstream 448 10834355 ~ 10891081 (+) True G2295704
TU2626130 lncRNA upstream 1999 10889077 ~ 10889530 (+) True G2295759
TU2626109 lncRNA upstream 44805 10845415 ~ 10846724 (+) True G2295742
TU2626085 lncRNA upstream 73695 10817512 ~ 10817834 (+) True G2295721
TU2626058 lncRNA upstream 75169 10814938 ~ 10816360 (+) True G2295694
TU2626181 lncRNA downstream 56232 10956157 ~ 10956365 (+) True G2295799
TU2626198 lncRNA downstream 78428 10978353 ~ 11005987 (+) True G2295811
TU2626201 lncRNA downstream 109250 11009175 ~ 11012661 (+) True G2295813
TU2626214 lncRNA downstream 117518 11017443 ~ 11060069 (+) True G2295826
TU2626237 lncRNA downstream 148596 11048521 ~ 11049277 (+) True G2295849
XM_036971572.1 mRNA upstream 82130 10759053 ~ 10809399 (+) True LOC110489377
XM_036971573.1 mRNA upstream 96439 10759051 ~ 10795090 (+) False LOC110489377
XM_021559827.2 mRNA upstream 215929 10670248 ~ 10675600 (+) True polr1f
XR_005041388.1 mRNA upstream 222477 10666690 ~ 10669052 (+) False LOC110487909
NM_001124657.1 mRNA downstream 102123 11002048 ~ 11004436 (+) True il6
XM_021559855.2 mRNA downstream 293125 11193050 ~ 11234468 (+) True LOC110487935
XR_005041365.1 mRNA downstream 363607 11263532 ~ 11264866 (+) False LOC118946500
XM_036971459.1 mRNA downstream 653424 11553349 ~ 11656524 (+) False LOC110487925
XM_036971460.1 mRNA downstream 653424 11553349 ~ 11656524 (+) False LOC110487925
TU2625227 other upstream 370222 10514954 ~ 10521307 (+) True LOC110487904
TU2625098 other upstream 567941 10318852 ~ 10323588 (+) True LOC118946540
TU2624966 other upstream 759878 10130116 ~ 10131651 (+) False G2294925
TU2624382 other upstream 1553774 9335335 ~ 9337755 (+) True G2294452
TU2623927 other upstream 1788343 9094792 ~ 9103186 (+) True G2294081
TU2626619 other downstream 385568 11285493 ~ 11290303 (+) True G2296150
TU2626760 other downstream 663622 11563547 ~ 11564590 (+) True G2296278
TU2626940 other downstream 1006782 11906707 ~ 11908666 (+) False LOC110487932
TU2626989 other downstream 1015271 11915196 ~ 11918140 (+) False G2296450
TU2629183 other downstream 2730137 13630062 ~ 13630795 (+) True G2298390

Expression Profile