RNA id: TU2629194


Basic Information

Item Value
RNA id TU2629194
length 206
lncRNA type intronic
GC content 0.48
exon number 1
gene id G2298400
representative True

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 13649908 ~ 13650113 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

ctccttcttcctctctctctcttcctctcgcataattcttcctctctgtctcttcctctctccctcttcctctctccttcttcctctctctctcttcctctctctctcttcctctctccttcttcctctctccttattcctctctccctcttcctcgctatttcttcctctttctcttcctctttccctcttcctctatccttCTT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU2629186 lncRNA upstream 20809 13628346 ~ 13629099 (+) True G2298392
TU2629180 lncRNA upstream 27439 13622217 ~ 13622469 (+) True G2298387
TU2629178 lncRNA upstream 30411 13619284 ~ 13619497 (+) True G2298385
TU2629177 lncRNA upstream 32715 13616988 ~ 13617193 (+) True G2298384
TU2629174 lncRNA upstream 40291 13609324 ~ 13609617 (+) True G2298381
TU2629195 lncRNA downstream 204 13650317 ~ 13650619 (+) True G2298401
TU2629197 lncRNA downstream 2385 13652498 ~ 13652734 (+) True G2298403
TU2629202 lncRNA downstream 17337 13667450 ~ 13667672 (+) True G2298408
TU2629203 lncRNA downstream 18635 13668748 ~ 13668974 (+) True G2298409
TU2629210 lncRNA downstream 31792 13681905 ~ 13682124 (+) True G2298416
XM_036970609.1 mRNA upstream 158320 13274220 ~ 13491588 (+) True LOC118946451
XM_036971819.1 mRNA upstream 1177660 12425043 ~ 12472248 (+) False LOC110487937
XM_036971820.1 mRNA upstream 1177660 12425043 ~ 12472248 (+) False LOC110487937
XM_036971821.1 mRNA upstream 1177660 12453662 ~ 12472248 (+) True LOC110487937
XR_005041309.1 mRNA upstream 1235759 12322871 ~ 12414149 (+) True col8a2
XM_036971044.1 mRNA downstream 200862 13850975 ~ 14001721 (+) False LOC110487940
XM_036971045.1 mRNA downstream 200862 13850975 ~ 14001721 (+) False LOC110487940
XM_036971046.1 mRNA downstream 200862 13850975 ~ 14001721 (+) False LOC110487940
XM_021559863.2 mRNA downstream 494888 14145001 ~ 14175807 (+) True LOC110487944
XM_021559866.2 mRNA downstream 528206 14178319 ~ 14187277 (+) False LOC110487945
TU2629183 other upstream 19113 13630062 ~ 13630795 (+) True G2298390
TU2626989 other upstream 1731768 11915196 ~ 11918140 (+) False G2296450
TU2626940 other upstream 1741242 11906707 ~ 11908666 (+) False LOC110487932
TU2626760 other upstream 2085318 11563547 ~ 11564590 (+) True G2296278
TU2626619 other upstream 2359605 11285493 ~ 11290303 (+) True G2296150
TU2629574 other downstream 103154 13753267 ~ 13753517 (+) True G2298739
TU2629753 other downstream 364119 14014232 ~ 14015587 (+) True G2298884
TU2629857 other downstream 557053 14207166 ~ 14223877 (+) False LOC118936620
TU2629858 other downstream 568788 14218901 ~ 14223877 (+) True LOC118936620
TU2630121 other downstream 653623 14303736 ~ 14304232 (+) True G2299191

Expression Profile