RNA id: TU2629581


Basic Information

Item Value
RNA id TU2629581
length 201
lncRNA type inter_gene
GC content 0.44
exon number 1
gene id G2298746
representative True

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 13757019 ~ 13757219 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

cagttaggatgttaaagcttgggtgcaaatgggtcttccaaatggacaatgaccccaaacatacttccaaagttgtggcaaaatgacttaaggacaagaaattcaaggtattggagtgggcatcacaaagctctgacctcaatcctatagaacatttgtgggcggaactgaaaaagcatgtgcgagcaaggaggcctacaa

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU2628939 lncRNA upstream 25845 13727257 ~ 13731174 (+) False G2298167
TU2628940 lncRNA upstream 25845 13727257 ~ 13731174 (+) False G2298167
TU2628941 lncRNA upstream 25845 13727257 ~ 13731174 (+) False G2298167
TU2628942 lncRNA upstream 25845 13727257 ~ 13731174 (+) True G2298167
TU2628955 lncRNA upstream 36287 13720191 ~ 13720732 (+) True G2298179
TU2629585 lncRNA downstream 4753 13761972 ~ 13764137 (+) True G2298748
TU2629590 lncRNA downstream 7494 13764713 ~ 13764995 (+) True G2298750
TU2629592 lncRNA downstream 7963 13765182 ~ 13765408 (+) True G2298752
TU2629694 lncRNA downstream 127537 13884756 ~ 13885113 (+) True G2298835
TU2629706 lncRNA downstream 161197 13918416 ~ 13920094 (+) True G2298847
XM_036970608.1 mRNA upstream 32030 13507588 ~ 13724989 (+) False LOC110487938
XM_036970609.1 mRNA upstream 265431 13274220 ~ 13491588 (+) True LOC118946451
XM_036971819.1 mRNA upstream 1284771 12425043 ~ 12472248 (+) False LOC110487937
XM_036971044.1 mRNA downstream 93756 13850975 ~ 14001721 (+) False LOC110487940
XM_036971045.1 mRNA downstream 93756 13850975 ~ 14001721 (+) False LOC110487940
XM_036971046.1 mRNA downstream 93756 13850975 ~ 14001721 (+) False LOC110487940
XM_021559863.2 mRNA downstream 387782 14145001 ~ 14175807 (+) True LOC110487944
XM_021559866.2 mRNA downstream 421100 14178319 ~ 14187277 (+) False LOC110487945
TU2629574 other upstream 3502 13753267 ~ 13753517 (+) True G2298739
TU2629183 other upstream 126224 13630062 ~ 13630795 (+) True G2298390
TU2626989 other upstream 1838879 11915196 ~ 11918140 (+) False G2296450
TU2626940 other upstream 1848353 11906707 ~ 11908666 (+) False LOC110487932
TU2626760 other upstream 2192429 11563547 ~ 11564590 (+) True G2296278
TU2629753 other downstream 257013 14014232 ~ 14015587 (+) True G2298884
TU2629857 other downstream 449947 14207166 ~ 14223877 (+) False LOC118936620
TU2629858 other downstream 461682 14218901 ~ 14223877 (+) True LOC118936620
TU2630121 other downstream 546517 14303736 ~ 14304232 (+) True G2299191
TU2630211 other downstream 661442 14418661 ~ 14419677 (+) True G2299272

Expression Profile