RNA id: TU2629694



Basic Information


Item Value
RNA id TU2629694
length 266
lncRNA type intronic
GC content 0.55
exon number 2
gene id G2298835
representative True

Chromosome Information


Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 13884756 ~ 13885113 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


cacccatcctgtctcatgtcctccatctctcctctctctctctttccacccatcctgtctcctgtcctccatctctcctctctctctctttccacccctcctaggtcctgtcctccatctctcctctctctctctttccacccctcctcggtcctgtcctccatctctcatctctctctctttccacccatcctgtctcctgtcctcaatctctcctctctctctagccacccatcctgtctcctttcctccatctctcctctctc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2629592 lncRNA upstream 119348 13765182 ~ 13765408 (+) True G2298752
TU2629590 lncRNA upstream 119761 13764713 ~ 13764995 (+) True G2298750
TU2629585 lncRNA upstream 120619 13761972 ~ 13764137 (+) True G2298748
TU2629581 lncRNA upstream 127537 13757019 ~ 13757219 (+) True G2298746
TU2628941 lncRNA upstream 153582 13727257 ~ 13731174 (+) False G2298167
TU2629706 lncRNA downstream 33303 13918416 ~ 13920094 (+) True G2298847
TU2629667 lncRNA downstream 94161 13979274 ~ 14003434 (+) False LOC110487940
TU2629736 lncRNA downstream 103896 13989009 ~ 13995301 (+) False G2298874
TU2629738 lncRNA downstream 107779 13992892 ~ 13995301 (+) True G2298874
TU2629666 lncRNA downstream 116518 14001631 ~ 14003434 (+) False LOC110487940
XM_036970608.1 mRNA upstream 159767 13507588 ~ 13724989 (+) False LOC110487938
XM_036970609.1 mRNA upstream 393168 13274220 ~ 13491588 (+) True LOC118946451
XM_036971819.1 mRNA upstream 1412508 12425043 ~ 12472248 (+) False LOC110487937
XM_021559863.2 mRNA downstream 259888 14145001 ~ 14175807 (+) True LOC110487944
XM_021559866.2 mRNA downstream 293206 14178319 ~ 14187277 (+) False LOC110487945
XM_021559865.2 mRNA downstream 293210 14178323 ~ 14187277 (+) True LOC110487945
XM_036971574.1 mRNA downstream 322260 14207373 ~ 14225546 (+) False LOC118936620
XM_036971576.1 mRNA downstream 333079 14218192 ~ 14225549 (+) False LOC118936620
TU2629574 other upstream 131239 13753267 ~ 13753517 (+) True G2298739
TU2629183 other upstream 253961 13630062 ~ 13630795 (+) True G2298390
TU2626989 other upstream 1966616 11915196 ~ 11918140 (+) False G2296450
TU2626940 other upstream 1976090 11906707 ~ 11908666 (+) False LOC110487932
TU2626760 other upstream 2320166 11563547 ~ 11564590 (+) True G2296278
TU2629753 other downstream 129119 14014232 ~ 14015587 (+) True G2298884
TU2629857 other downstream 322053 14207166 ~ 14223877 (+) False LOC118936620
TU2629858 other downstream 333788 14218901 ~ 14223877 (+) True LOC118936620
TU2630121 other downstream 418623 14303736 ~ 14304232 (+) True G2299191
TU2630211 other downstream 533548 14418661 ~ 14419677 (+) True G2299272

Expression Profile