Item | Value |
---|---|
RNA id | TU2633115 |
length | 206 |
lncRNA type | intronic |
GC content | 0.35 |
exon number | 2 |
gene id | G2301764 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_050572.1 |
NCBI id | CM025859.1 |
chromosome length | 41837469 |
location | 17050009 ~ 17051608 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
species | rainbow trout (Oncorhynchus mykiss) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU2633108 | lncRNA | upstream | 5170 | 17043913 ~ 17044839 (+) | True | G2301758 |
TU2633076 | lncRNA | upstream | 35071 | 16998301 ~ 17014938 (+) | True | G2301726 |
TU2633064 | lncRNA | upstream | 70496 | 16974433 ~ 16979513 (+) | True | G2301716 |
TU2632934 | lncRNA | upstream | 94442 | 16954003 ~ 16955567 (+) | True | calcr |
TU2632935 | lncRNA | upstream | 96377 | 16952941 ~ 16953632 (+) | False | calcr |
TU2633124 | lncRNA | downstream | 9482 | 17061090 ~ 17063174 (+) | True | G2301773 |
TU2633126 | lncRNA | downstream | 10167 | 17061775 ~ 17062837 (+) | True | G2301774 |
TU2633127 | lncRNA | downstream | 11277 | 17062885 ~ 17064464 (+) | True | G2301775 |
TU2633658 | lncRNA | downstream | 192444 | 17244052 ~ 17244850 (+) | True | G2302251 |
TU2633689 | lncRNA | downstream | 218690 | 17270298 ~ 17271024 (+) | True | G2302279 |
XM_036971174.1 | mRNA | upstream | 94439 | 16846734 ~ 16955570 (+) | False | calcr |
XM_036971175.1 | mRNA | upstream | 94439 | 16895129 ~ 16955570 (+) | False | calcr |
XM_021559977.2 | mRNA | upstream | 215357 | 16830708 ~ 16834652 (+) | False | LOC110488022 |
XM_021559976.2 | mRNA | upstream | 215357 | 16830710 ~ 16834652 (+) | False | LOC110488022 |
XM_021559974.2 | mRNA | upstream | 263170 | 16785333 ~ 16786839 (+) | False | LOC110488019 |
XM_036971023.1 | mRNA | downstream | 242735 | 17294343 ~ 17360159 (+) | False | LOC110488025 |
XM_021559983.2 | mRNA | downstream | 317160 | 17368768 ~ 17374337 (+) | False | fam133b |
XM_021559982.2 | mRNA | downstream | 317161 | 17368769 ~ 17374337 (+) | True | fam133b |
XM_021559987.2 | mRNA | downstream | 328561 | 17380169 ~ 17388113 (+) | False | LOC110488030 |
XM_021559986.2 | mRNA | downstream | 328566 | 17380174 ~ 17388113 (+) | False | LOC110488030 |
TU2632933 | other | upstream | 215624 | 16827065 ~ 16834385 (+) | True | LOC110488022 |
TU2632885 | other | upstream | 261470 | 16785368 ~ 16788539 (+) | False | LOC110488019 |
TU2632840 | other | upstream | 373338 | 16669607 ~ 16676671 (+) | False | G2301522 |
TU2632809 | other | upstream | 410368 | 16636539 ~ 16639641 (+) | True | LOC110488017 |
TU2632763 | other | upstream | 524615 | 16524510 ~ 16525394 (+) | True | G2301452 |
TU2633200 | other | downstream | 134957 | 17186565 ~ 17193117 (+) | True | G2301841 |
TU2635466 | other | downstream | 1725737 | 18777345 ~ 18783027 (+) | True | G2303854 |
TU2635622 | other | downstream | 1949734 | 19001342 ~ 19015593 (+) | False | LOC110488049 |
TU2636184 | other | downstream | 2302603 | 19354211 ~ 19359789 (+) | True | dgat1a |
TU2636452 | other | downstream | 2776609 | 19828217 ~ 19829961 (+) | True | G2304678 |