RNA id: TU2634434


Basic Information

Item Value
RNA id TU2634434
length 246
lncRNA type intronic
GC content 0.41
exon number 1
gene id G2302958
representative True

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 18429074 ~ 18429319 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

gatcatagagACGCAACTATACTTTATATAACTCTACCCTTTCACACAGCAAAAATGTAACCTGCAATTATCGTAATTGGCTGCTCACTGATCGGCTGATTGAAATGCACCTTTTGAATTTGAAAACCTACAGTGTGTGCTGGTCTTGTTCACATCCTCCCGGCTACTTACCATACAGCCATTGAGTGTAATTGACAATACTTGGCTGATAGATTTGCCAGACCAGTGTTCAGAATGTTCTGCCAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU2634433 lncRNA upstream 2629 18426205 ~ 18426445 (+) True G2302957
TU2634415 lncRNA upstream 37604 18391249 ~ 18391470 (+) True G2302939
TU2634358 lncRNA upstream 43154 18317805 ~ 18385920 (+) True G2302882
TU2634407 lncRNA upstream 52409 18376172 ~ 18376665 (+) True G2302931
TU2634389 lncRNA upstream 70836 18355849 ~ 18358238 (+) True G2302913
TU2635340 lncRNA downstream 164347 18593666 ~ 18593882 (+) True G2303752
TU2635346 lncRNA downstream 168703 18598022 ~ 18598294 (+) True G2303758
TU2635351 lncRNA downstream 174337 18603656 ~ 18603969 (+) True G2303763
TU2635362 lncRNA downstream 205775 18635094 ~ 18646388 (+) True LOC110488043
TU2635456 lncRNA downstream 320292 18749611 ~ 18750729 (+) True G2303845
XM_036970730.1 mRNA upstream 196174 17862429 ~ 18232900 (+) True LOC110489398
XM_036971579.1 mRNA upstream 616720 17787777 ~ 17812354 (+) True LOC110488037
XR_005041323.1 mRNA upstream 644478 17763561 ~ 17784596 (+) False LOC110488036
XM_021560002.2 mRNA downstream 119634 18548953 ~ 18557288 (+) True LOC110488042
XM_036970928.1 mRNA downstream 177877 18607196 ~ 18669361 (+) False LOC110488043
XM_021560003.2 mRNA downstream 177882 18607201 ~ 18669361 (+) False LOC110488043
XM_021560006.2 mRNA downstream 205741 18635060 ~ 18669361 (+) False LOC110488043
XM_021560005.2 mRNA downstream 205971 18635290 ~ 18669361 (+) False LOC110488043
TU2633200 other upstream 1235957 17186565 ~ 17193117 (+) True G2301841
TU2632933 other upstream 1594689 16827065 ~ 16834385 (+) True LOC110488022
TU2632885 other upstream 1640535 16785368 ~ 16788539 (+) False LOC110488019
TU2632840 other upstream 1752403 16669607 ~ 16676671 (+) False G2301522
TU2632809 other upstream 1789433 16636539 ~ 16639641 (+) True LOC110488017
TU2635466 other downstream 348026 18777345 ~ 18783027 (+) True G2303854
TU2635622 other downstream 572023 19001342 ~ 19015593 (+) False LOC110488049
TU2636184 other downstream 924892 19354211 ~ 19359789 (+) True dgat1a
TU2636452 other downstream 1398898 19828217 ~ 19829961 (+) True G2304678
TU2637856 other downstream 2124014 20553333 ~ 20553684 (+) True G2305956

Expression Profile