RNA id: TU2637902


Basic Information

Item Value
RNA id TU2637902
length 206
lncRNA type inter_gene
GC content 0.50
exon number 1
gene id G2306001
representative True

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 20595856 ~ 20596061 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

TCTAGAGTAGACCCTCTGCCCTACCCTACATGCCTGTACAGAGTAGACCCTCTATCCTACCCTCCAAGActgtatagagtagaccctcAATCCTACCTTCCAAgcctgtatagagtagaccctctatgCTACCCTCCAAGCCTGTAAAGTAGATCCTCCATCATACACCCTCCAAGCAtgtatagagtagaccctctaccctaccc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU2637894 lncRNA upstream 16549 20578962 ~ 20579307 (+) True G2305993
TU2637878 lncRNA upstream 27490 20568116 ~ 20568366 (+) True G2305978
TU2637874 lncRNA upstream 30521 20565128 ~ 20565335 (+) True G2305974
TU2637867 lncRNA upstream 35992 20559368 ~ 20559864 (+) True G2305967
TU2637855 lncRNA upstream 42619 20552946 ~ 20553237 (+) True G2305955
TU2637952 lncRNA downstream 35458 20631519 ~ 20631755 (+) True G2306051
TU2637960 lncRNA downstream 41327 20637388 ~ 20637617 (+) True G2306059
TU2637991 lncRNA downstream 83068 20679129 ~ 20679376 (+) True G2306087
TU2637996 lncRNA downstream 90369 20686430 ~ 20686899 (+) True G2306092
TU2638012 lncRNA downstream 115959 20712020 ~ 20712309 (+) True G2306108
XR_005041341.1 mRNA upstream 594482 19994142 ~ 20001374 (+) True LOC118946489
XM_036971805.1 mRNA upstream 811417 19760234 ~ 19784439 (+) False ptk2aa
XR_005041417.1 mRNA downstream 119008 20715069 ~ 20719092 (+) False LOC118946542
XM_021560045.2 mRNA downstream 607031 21203092 ~ 21205078 (+) False ccdc127b
XM_036971420.1 mRNA downstream 626860 21222921 ~ 21229758 (+) False LOC110488068
XM_021560050.2 mRNA downstream 626860 21222921 ~ 21231008 (+) False LOC110488068
XM_021560051.2 mRNA downstream 626860 21222921 ~ 21231008 (+) True LOC110488068
TU2637856 other upstream 42172 20553333 ~ 20553684 (+) True G2305956
TU2636452 other upstream 765895 19828217 ~ 19829961 (+) True G2304678
TU2636184 other upstream 1236067 19354211 ~ 19359789 (+) True dgat1a
TU2635622 other upstream 1580263 19001342 ~ 19015593 (+) False LOC110488049
TU2635466 other upstream 1812829 18777345 ~ 18783027 (+) True G2303854
TU2638086 other downstream 217128 20813189 ~ 20814189 (+) False G2306173
TU2638087 other downstream 217128 20813189 ~ 20814298 (+) True G2306173
TU2638628 other downstream 711371 21307432 ~ 21311878 (+) False LOC110488072
TU2638627 other downstream 711497 21307558 ~ 21311807 (+) True LOC110488072
TU2638636 other downstream 724562 21320623 ~ 21323896 (+) True G2306688

Expression Profile