RNA id: TU2641977



Basic Information


Item Value
RNA id TU2641977
length 206
lncRNA type inter_gene
GC content 0.28
exon number 1
gene id G2309629
representative True

Chromosome Information


Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 24631361 ~ 24631566 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ATACAATACTCATCATTAATACAAAAGCAATATAGGTCAAAAGAGAATAGACTACTAAAGAAAATAGAGGAAATAACAGCGCAGGTAGTTGGTAATGGAAACTGTACTATAGAGTAACAAAATAGGTAAGaggaaaaacaaataattcaagGAACTTGTTCAACAACGATCAAGTGTAATTTATTACAAAATATTTTAAGCATATA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2641976 lncRNA upstream 497 24630381 ~ 24630864 (+) True G2309628
TU2641966 lncRNA upstream 18578 24612546 ~ 24612783 (+) True G2309618
TU2641965 lncRNA upstream 22804 24608347 ~ 24608557 (+) True G2309617
TU2641963 lncRNA upstream 24304 24606738 ~ 24607057 (+) True G2309615
TU2641959 lncRNA upstream 31239 24599342 ~ 24600122 (+) True G2309612
TU2641979 lncRNA downstream 2618 24634184 ~ 24634412 (+) True G2309631
TU2641990 lncRNA downstream 20119 24651685 ~ 24652029 (+) True G2309642
TU2642019 lncRNA downstream 63765 24695331 ~ 24695936 (+) True G2309671
TU2642030 lncRNA downstream 79872 24711438 ~ 24711726 (+) True G2309682
TU2642044 lncRNA downstream 102613 24734179 ~ 24734420 (+) True G2309696
XM_021560223.2 mRNA upstream 164118 24420174 ~ 24467243 (+) False LOC110488151
XM_021560231.2 mRNA downstream 165752 24797318 ~ 24915300 (+) False LOC110488157
XM_021560232.2 mRNA downstream 165752 24797318 ~ 24915300 (+) False LOC110488157
XM_021560234.2 mRNA downstream 165752 24797318 ~ 24915300 (+) False LOC110488157
XM_021560239.2 mRNA downstream 165752 24797318 ~ 24915300 (+) False LOC110488157
XM_021560242.2 mRNA downstream 165753 24797319 ~ 24915300 (+) False LOC110488157
TU2641635 other upstream 473925 24151687 ~ 24157436 (+) True LOC110488142
TU2641501 other upstream 650582 23979350 ~ 23980779 (+) False LOC110488133
TU2641502 other upstream 650582 23979468 ~ 23980779 (+) False LOC110488133
TU2641493 other upstream 650582 23979557 ~ 23980779 (+) False LOC110488133
TU2640356 other upstream 2026640 22604320 ~ 22604721 (+) True G2308224
TU2644105 other downstream 1103628 25735194 ~ 25736847 (+) True G2311528
TU2644579 other downstream 1287586 25919152 ~ 25919800 (+) True G2311978
TU2644928 other downstream 1693586 26325152 ~ 26325383 (+) True G2312300
TU2645416 other downstream 2101738 26733304 ~ 26733645 (+) True G2312752
TU2645462 other downstream 2185118 26816684 ~ 26820896 (+) False LOC110488193

Expression Profile