RNA id: TCONS_00059051


Basic Information

Item Value
RNA id TCONS_00059051
length 5990
RNA type mRNA
GC content 0.49
exon number 41
gene id XLOC_030201
representative False

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 32206378 ~ 32217579 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

CAGAAGGGCTGCAGAGGAGACCTCAGACGTTCCTGCCAGTGGGTAGTGAATTATTCATCTGGTCTCAAGGAACGCAAGTAAGCCGCCACCATGAGTACTGACGCGGAGATGGCCATTTATGGCAAGGCTGCCATTTTCCTCCGTAAGCCTGAGAAGGAGAGAATTGAAGCTCAGAGCAAACCATTTGATGCCAAAACCGCTTGTTATGTGGTTGATGACAAAGAGCTGTACGTCAAGGGAACAATCAAGAGCAAAGATGGTGGCAAAGTCACTGTTGTTACACTTGACACTCAGACGgaGAAAGTTGTTAAGGAGGATGATGTCCACCCAATGAATCCTCCCAAGTTTGACAAGATTGAGGACATGGCCATGATGACCCATCTCAATGAACCCTCTGTGCTGTATAACCTCAAAGAGCGTTATGCAGCATGGATGATCTACACCTACTCTGGGCTGTTCTGCGCCACTGTAAACCCCTACAAGTGGCTCCCAGTGTATGACGCAGAAGTGGTTGCTGCCTACAGAGGCAAGAAGCGTATGGAGGCTCCACCCCACATCTTCTCTGTCTCTGACAACGCCTATCAGTTCATGTTGACTGACAGAGAGAACCAGTCTGTCCTGATTACTGGAGAATCTGGTGCTGGAAAGACTGTGAACACCAAACGTGTCATCCAGTACTTTGCCACCGTTGCAGTTCAGGGCGGTGACAAGAAGAAAGAGCAAGCTGCTGGCAAAATGCAGGGCTCTCTTGAGGATCAGATCATTGCTGCCAACCCTCTGCTTGAGGCTTATGGTAATGCCAAGACTGTGAGAAATGACAACTCCTCTCGTTTTGGTAAATTCATCAGAATTCATTTCGGCACATCTGGAAAACTGGCTAGTGCTGACATTGAGACATATCTGCTGGAGAAATCTAGAGTGACATTCCAGCTTCCAGATGAGAGAGGCTACCACATCTTCTACCAGATGATGACCAACCACAAGCCTGAGCTGATTGAAATGACGCTCATCACCACCAACCCCTATGACTTCCCCATGTGCAGTCAGGGTCAGATCACAGTGGCAAGCATTGATGATAAAGAGGAGCTGGTTGCTACTGATACTGCTATTGACATTCTGGGCTTCACTGGTGAAGAGAAAATGGGTATCTACAAGTTCACTGGAGCTGTGCTTCATCATGGTAACATGAAGTTCAAGCAGAAGCAGCGTGAGGAGCAGGCAGAGCCTGATGGCACAGAGGAGGCTGACAAAATCGCTTACCTTCTGGGTTTGAACTCTGCTGATATGCTGAAGGCTTTGTGCTACCCCCGAGTGAAGGTCGGAAATGAGTTTGTGACCAAAGGACAGACTGTGCCACAGGTGTACAACTCTGTTAGCGCCTTGTCCAAATCTATCTATGAGAGGATGTTCTTGTGGATGGTCATTCGTATCAACCAGATGTTGGacacaaaacaacaaagaaatttCTTCATTGGTGTGCTGGATATTGCTGGCTTTGAGATCTTTGATTTCAACAGCATGGAGCAGCTGTGCATCAACTTCACTAATGAGAAACTGCAACAGTTTTTCAACCACCACATGTTTGTGCTGGAACAAGAGGAGTACAAGAAGGAGGGCATTGTTTGGGAGTTCATTGACTTCGGCATGGACTTGGCCGCTTGCATTGAGCTCATTGAGAAGCCCTTAGGTATCTTCTCCATCCTTGAAGAGGAGTGCATGTTCCCCAAGGCTACAGACACTTCCTTCAAGAACAAGCTGTATGATCAGCATCTTGGCAAGTGCAATGCTTTCCAGAAACCAAAGCCTGCCAAAGGCAAGGCTGAGGCTCACTTCTCCCTGGTCCACTATGCTGGAACTGTGGACTACAACATTTCTGGCTGGCTGGACAAGAACAAGGATCCACTGAACGAGTCTGTTGTGCAGCTTTACCAGAAGTCTTCTGTCAAACTGCTGGCTACTCTCTACCCACCTGTTGTTGAGGAGACTGGTGGCGGAAAGAAGGGAGGCAAAAAGAAGGGTGGTTCCATGCAGACTGTGTCTTCCCAGTTCAGGGAAAACTTGGGCAAGCTCATGACCAACTTGAGGAGCACTCACCCTCACTTTGTGCGTTGTCTGATTCCTAACGAGTCCAAGACTCCAGGTCTTATGGAGAACTTCCTGGTTATCCACCAGCTGAGGTGTAACGGTGTACTGGAGGGTATCAGAATCTGCAGAAAGGGTTTCCCCAGCAGAATCCTCTATGGTGACTTCAAGCAGAGATACAAGGTGTTGAATGCCAGTGTTATCCCAGAGGGACAGTTCATTGACAACAAGAAGGCCAGTGAGAAACTCTTGGGATCCATCGACGTTAATCATGATGAGTACAGATTTGGACACACAAAGGTGTTCTTCAAAGCTGGTCTTCTGGGTACCCTTGAGGAGATGCGTGATGAGAAACTGGCAACTCTAGTCACAATGACCCAGGCTCTCTGCCGTGCTTACCTGATGAGGAGAGAGTTTGTGAAGATGATGGAGAGGAGGGAGTCCATTTACACCATCCAGTACAACATCCGCTCATTTATGAATGTCAAACACTGGCCATGGATGAAGGTTTACTACAAGATTAAGCCTCTGCTGAAGAGTGCTGAGACTGAGAAAGAGCTGGCAACCATGAAAGAGGACTTTGTCAAATGTAAAGAGGCTTTGGCCAAGGCTGAAGCCAAAAAGAAAGAGCTGGAAGAGAAGATGGTGGCACTGCTGCAAGAGAAAAATGATCTGCAGCTGGCAGTGGCTTCTGAATCAGAGAATCTCTCAGATGCTGAAGAGAGGTGTGAGGGTCTGATCAAGAGCAAAATCCAGCTTGAGGCTAAACTCAAAGAGACAACTGAGAGACTGGAGGATGAGGAAGAAATCAATGCTGAACTGACAGCCAAGAAGAGGAAACTGGAGGACGAGTGCTCTGAGCTGAAGAAGGACATTGATGACCTGGAGCTCACCTTGGCTAAAGTGGAAAAGGAAAAACATGCCACTGAGAATAAGGTCAAGAACTTGACAGAGGAAATGGCATCTCAAGATGAGAGCATTGCCAAGCTTACAAAGGAGAAGAAAGCCCTCCAAGAGGCACATCAGCAGACTCTGGATGATCTTCAGGCTGAGGAGGACAAAGTCAACACCCTGACCAAATCCAAGACAAAGCTTGAGCAGCAAGTTGATGATCTTGAGGGTTCCCTTGAACAAGAAAAGAAGCTTCGTATGGACCTGGAGAGAGCCAAGAGAAAGCTTGAAGGAGATTTGAAATTGGCCCAAGAGTCTATTATGGACCTGGAGAATGACAAGCAGCAGTCtgaagagaaaattaaaaaGAAAGACTTCGAAACTGCTCAGCTGCTCAGCAAGATTGAAGATGAACAATCTTTGGGTGCTCAGCTCCAGAAGAAGATTAAAGAGCTGCAGGCTCGCATTGAGGAACTGGAGGAAGAGATTGAGGCTGAGCGTGCTGCTCGTGCCAAGGTTGAGAAGCAGAGAGCCGATCTCTCCAGGGAACTTGAGGAGATCAGTGAGAGGCTTGAGGAGGCTGGAGGAGCCACTGCTGCTCAAATCGAGATGAATAAGAAGCGTGAAGCTGAATTCCAGAAGCTGCGTCGTGATCTTGAAGAGTCCACCCTTCAGCATGAAGCTACTGCTGCTGCCCTGCGCAAGAAGCAGGCTGACAGTGTGGCTGAGCTGGGAGAGCAAATCGACAACCTCCAGCGTGTCAAGCAGAAGCTTGAGAAAGAGAAGAGTGAATACAAAATGGAGATCGATGATCTCTCCAGCAACATGGAGGCTGTTGCCAAAGCAAAGGCCAATCTTGAGAAGATGTGCCGCACAGTTGAGGACCAACTTAGTGAAATTAAGTCCAAGAATGATGAGAACCTTCGCCAGATAAATGATCTCAGTGCTCAAAGAGCAAGACTTCAAACTGAGAATGGTGAGTTTGGCCGTCAGCTTGAGGAGAAGGAAGCTCTGGTTTCTCAGCTCACACGAGGAAAACAGGCTTTCACTCAGCAAATTGAGGAGCTTAAGAGGCAGATTGAAGAGGAGGTTAagGCTAAGAACGCACTGGCCCACGCTGTACAATCAGCCCGTCATGACTGCGACCTGCTCCGTGAGCAGTTTGAGGAAGAGCAGGAGGCAAAGGCTGAGCTGCAGCGGGGAATGTCAAAGGCCAACAGTGAGGTTGCTCAGTGGAGAACCAAATATGAAACTGATGCCATCCAGCGCACAGAAGAACTTGAAGAGTCTAAGAAGAAGCTTGCTCAGCGTCTGCAAGAGGCAGAGGAACAAATTGAGGCAGTGAACTCCAAATGTGCATCTCTGGAGAAGACCAAACAGAGACTCCAGGGTGAAGTGGAGGACCTCATGATTGATGTGGAGAGAGCCAATGCTTTGGCTGCCAACCTTGACAAAAAGCAGAGGAACTTTGACAAGGTCCTGGCAGAATGGAAGCAGAAATATGAGGAAGGTCAGGCAGAGCTGGAAGGTGCCCAGAAAGAAGCTCGTTCACTCAGCACTGAGCTGTTCAAGATGAAGAACTCCTATGAGGAGACTCTGGATCAGCTGGAGACCCTCAAGAGAGAGAACAAGAATCTGCAGCAGGAGATTTCAGATCTGACAGAGCAATTAGGTGAGACTGGTAAGAGCATCCATGAGCTGGAAAAGGCCAAGAAGACAGTGGAGACTGAGAAGGCAGAGATTCAAACTGCCCTGGAAGAGGCTGAAGGCACCCTGGAGCATGAGGAGTCCAAGATTCTTCGTGTCCAGCTTGAGCTAAACCAGGTCAAGGGTGAGATTGACAGGAAGCTGGCAGAGAAGGATGAGGAGATGGAGCAGATCAAGAGGAACAGTCAGAGAGTTACTGAAGCCATGCagagcactctggactctgaagtCAGAAGCAGGAATGATGCTCTCAGAATCAAGAAGAAGATGGAGGGAGACCTTAATGAGATGGAGATTCAGCTGAGCCATGCCAATCGCCAGGCAGCTGAGGCCCAGAAACAGCTCAGAAATGTTCAGGCACAACTCAAAGATGCCCAGCTGCACCTTGATGATGCCGTGAGAGGACAGGAAGACATGAAGGAGCAGGTGGCCATGGTGGAGCGCAGAAACACTCTGATGCAGTCTGAGATTGAGGAGCTGAGAGCTGCTCTGGAGCAGACAGAGAGAGGACGCAAAGTGGCTGAACAAGAGCTGGTGGATGCCAGTGAGCGTGTTGGGCTGCTGCACTCTCAAAACACAAGTCTTCTGAACACCAAGAAGAAGCTTGAGACTGACCTTGTTCAGATCCAGAGTGAAGTTGAAGACACTGTACAGGAAGCCAGAAATGCAGAGGAGAAGGCCAAGAAGGCCATCACTGATGCTGCAATGATGGCAGAGGAGCTGAAGAAGGAGCAGGACACCAGTGCTCACCTTGAGAGGATGAAGAAGAATCTGGAGGTCACAGTCAAGGACCTGCAGCACCGTCTGGATGAGGCTGAGAATCTGGCCATGAAGGGAGGAAAAAAACAACTCCAGAAACTGGAGTCCAGAGTTCGTGAGCTTGAGAGTGAAGTTGAAGCAGAGCAGAGGCGTGGAGCTGATGCTGTTAAAGGCGTCCGCAAATATGAGAGAAGAGTCAAGGAGCTCACCTACCAGACTGAGGAGGACAAGAAGAATGTCAACAGACTGCAGGATCTGGTTGATAAGCTTCAGCTGAAGGTCAAGGCTTACAAGAGACAGTCTGAAGAAGCTGAGGAACAAGCCAACTCTCACCTGTCCAAGTTGAGGAAGGTGCAGCATGAGCTGGAGGAGGCTGAGGAGCGTGCTGATATTGCTGAGTCCCAGGTCAACAAGCTCAGAGCCAAGAGCCGTGACGCTGGAAAGGCCAAAGAAGAGTAAAGCCCTTAAACCTGAAGGAAGGCTCTACTGAAGTCATATAATATGACTGTTCTgtagatatatttttaaataaatatgtgctTACTGGAAAA

Function

GO:

id name namespace
GO:0048741 skeletal muscle fiber development biological_process
GO:0014823 response to activity biological_process
GO:0001501 skeletal system development biological_process
GO:0048706 embryonic skeletal system development biological_process
GO:0016459 myosin complex cellular_component
GO:0005524 ATP binding molecular_function
GO:0000166 nucleotide binding molecular_function
GO:0051015 actin filament binding molecular_function
GO:0003774 motor activity molecular_function
GO:0003779 actin binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-020604-1 Predicted to enable ATP binding activity; actin filament binding activity; and cytoskeletal motor activity. Acts upstream of or within embryonic skeletal system development; response to activity; and skeletal muscle fiber development. Predicted to be part of myosin complex. Is expressed in fin; musculature system; pharyngeal arch; and trunk. Human ortholog(s) of this gene implicated in arthrogryposis multiplex congenita; disease of cellular proliferation; and distal arthrogryposis (multiple). Orthologous to several human genes including MYH1 (myosin heavy chain 1); MYH4 (myosin heavy chain 4); and MYH8 (myosin heavy chain 8).

Ensembl:

ensembl_id ENSDART00000126873

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00061731 lncRNA upstream 119801 32083729 ~ 32086577 (+) True XLOC_030198
TCONS_00059039 lncRNA upstream 211824 31983191 ~ 31994554 (+) True XLOC_030195
TCONS_00061730 lncRNA upstream 288242 31911003 ~ 31918136 (+) True XLOC_030192
TCONS_00061729 lncRNA upstream 294300 31904847 ~ 31912078 (+) True XLOC_030191
TCONS_00059031 lncRNA upstream 338009 31867518 ~ 31868369 (+) True XLOC_030190
TCONS_00061732 lncRNA downstream 42584 32260163 ~ 32263220 (+) False XLOC_030204
TCONS_00059058 lncRNA downstream 42584 32260163 ~ 32264060 (+) True XLOC_030204
TCONS_00061733 lncRNA downstream 141301 32358880 ~ 32367481 (+) True XLOC_030206
TCONS_00059073 lncRNA downstream 633260 32850839 ~ 32856096 (+) False XLOC_030210
TCONS_00059076 lncRNA downstream 665121 32882700 ~ 32886071 (+) False XLOC_030211
TCONS_00059049 mRNA upstream 23696 32162684 ~ 32182682 (+) False XLOC_030200
TCONS_00059048 mRNA upstream 57849 32141790 ~ 32148529 (+) True XLOC_030199
TCONS_00059046 mRNA upstream 126186 32076109 ~ 32080192 (+) False XLOC_030197
TCONS_00059047 mRNA upstream 126186 32076136 ~ 32080192 (+) True XLOC_030197
TCONS_00059044 mRNA upstream 160081 32009542 ~ 32046297 (+) False XLOC_030196
TCONS_00059053 mRNA downstream 4176 32221755 ~ 32233860 (+) False XLOC_030202
TCONS_00059054 mRNA downstream 4724 32222303 ~ 32233860 (+) False XLOC_030202
TCONS_00059055 mRNA downstream 10959 32228538 ~ 32233862 (+) True XLOC_030202
TCONS_00059056 mRNA downstream 29293 32246872 ~ 32257316 (+) False XLOC_030203
TCONS_00059057 mRNA downstream 29731 32247310 ~ 32257249 (+) True XLOC_030203
TCONS_00059050 other upstream 23650 32178630 ~ 32182728 (+) True XLOC_030200
TCONS_00059033 other upstream 261656 31944607 ~ 31944722 (+) False XLOC_030193
TCONS_00059030 other upstream 337750 31860071 ~ 31868628 (+) False XLOC_030190
TCONS_00059020 other upstream 657591 31548312 ~ 31548787 (+) True XLOC_030185
TCONS_00059006 other upstream 1379486 30780600 ~ 30826892 (+) True XLOC_030177
TCONS_00059060 other downstream 127610 32345189 ~ 32346131 (+) True XLOC_030205
TCONS_00059063 other downstream 420069 32637648 ~ 32637765 (+) True XLOC_030208
TCONS_00059074 other downstream 640849 32858428 ~ 32859254 (+) True XLOC_030210
TCONS_00059077 other downstream 665128 32882707 ~ 32886909 (+) False XLOC_030211
TCONS_00059080 other downstream 667626 32885205 ~ 32885331 (+) True XLOC_030212

Expression Profile

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