RNA id: TU2644928



Basic Information


Item Value
RNA id TU2644928
length 232
RNA type TUCP
GC content 0.51
exon number 1
gene id G2312300
representative True

Chromosome Information


Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 26325152 ~ 26325383 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ATGGTGGCCGACCCCCTGAAGAAGGAAACCCTGCGGCTAGAGATCTCCTCACTCCTGGACAAAGGTGTCATCCGCAGGATTGAGAAATCAGAACGGCTAGGTGGGTTGTACTACACTTATTTTCTTGTCCCAAAAAGATACGGAGGGTTTCGACCGATTCTGGACCTCCGCAACCTCAATGAGTTCTTGAAGGTACTGAGGTTCCACATGCTGTCCCTAGCCCTCATGTTGC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2644908 lncRNA upstream 32022 26292891 ~ 26293130 (+) True G2312282
TU2644894 lncRNA upstream 50386 26274542 ~ 26274766 (+) True G2312268
TU2644891 lncRNA upstream 55467 26269462 ~ 26269685 (+) True G2312265
TU2644889 lncRNA upstream 57420 26267325 ~ 26267732 (+) True G2312263
TU2644886 lncRNA upstream 60243 26264688 ~ 26264909 (+) True G2312260
TU2644937 lncRNA downstream 8918 26334301 ~ 26334506 (+) True G2312309
TU2644939 lncRNA downstream 11745 26337128 ~ 26337353 (+) True G2312311
TU2644941 lncRNA downstream 12653 26338036 ~ 26338298 (+) True G2312313
TU2644942 lncRNA downstream 13146 26338529 ~ 26338821 (+) True G2312314
TU2645158 lncRNA downstream 39608 26364991 ~ 26365212 (+) True G2312514
XM_036970951.1 mRNA upstream 61118 26221709 ~ 26264034 (+) False LOC110488181
XM_021560278.2 mRNA upstream 61118 26221710 ~ 26264034 (+) False LOC110488181
XM_021560275.2 mRNA upstream 61118 26222677 ~ 26264034 (+) False LOC110488181
XM_021560277.2 mRNA upstream 61118 26222677 ~ 26264034 (+) False LOC110488181
XM_021560281.2 mRNA upstream 61118 26222677 ~ 26264034 (+) False LOC110488181
XM_021560283.2 mRNA downstream 170948 26496331 ~ 26509065 (+) True LOC110488183
XM_021560291.2 mRNA downstream 388728 26714111 ~ 26716280 (+) True LOC110488188
XM_021560292.2 mRNA downstream 422559 26747942 ~ 26750163 (+) True LOC110488189
XM_021560296.2 mRNA downstream 476656 26802039 ~ 26810237 (+) False LOC110488192
XM_021560297.2 mRNA downstream 476656 26802039 ~ 26810237 (+) False LOC110488192
TU2644579 other upstream 405352 25919152 ~ 25919800 (+) True G2311978
TU2644105 other upstream 588305 25735194 ~ 25736847 (+) True G2311528
TU2641635 other upstream 2167716 24151687 ~ 24157436 (+) True LOC110488142
TU2641501 other upstream 2344373 23979350 ~ 23980779 (+) False LOC110488133
TU2645416 other downstream 407921 26733304 ~ 26733645 (+) True G2312752
TU2645462 other downstream 491301 26816684 ~ 26820896 (+) False LOC110488193
TU2645463 other downstream 491301 26816684 ~ 26820896 (+) True LOC110488193
TU2645611 other downstream 708416 27033799 ~ 27039185 (+) True G2312933
TU2645715 other downstream 872461 27197844 ~ 27202811 (+) True LOC118946485

Expression Profile