RNA id: TU2645280



Basic Information


Item Value
RNA id TU2645280
length 230
lncRNA type inter_gene
GC content 0.51
exon number 1
gene id G2312631
representative True

Chromosome Information


Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 26540106 ~ 26540335 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ggcagagacagtggcagagacagaaacatgggcAGAGACAGtgccagagacagaaacatggacagagacagtgccagagacagaaacatggacagagacagaaacatgggcAGAGACAGtgccagagacagaaacatgggcagagacagaaacataggcagagacagtggcagagacagaaacatgggcAGAGACAGactaagagagaggcagagacagagacagaaaca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2645277 lncRNA upstream 6640 26533254 ~ 26533466 (+) True G2312628
TU2645268 lncRNA upstream 20152 26518701 ~ 26519954 (+) True G2312619
TU2645209 lncRNA upstream 96522 26442627 ~ 26443584 (+) True G2312561
TU2645202 lncRNA upstream 107732 26432160 ~ 26432374 (+) True G2312554
TU2645177 lncRNA upstream 144984 26393820 ~ 26395122 (+) True G2312531
TU2645284 lncRNA downstream 4921 26545256 ~ 26545572 (+) True G2312635
TU2645299 lncRNA downstream 23063 26563398 ~ 26563701 (+) True G2312650
TU2645319 lncRNA downstream 48130 26588465 ~ 26588769 (+) True G2312664
TU2645351 lncRNA downstream 87134 26627469 ~ 26628101 (+) False G2312691
TU2645353 lncRNA downstream 87134 26627469 ~ 26632291 (+) True G2312691
XM_021560283.2 mRNA upstream 31041 26496331 ~ 26509065 (+) True LOC110488183
XM_036970952.1 mRNA upstream 276072 26224806 ~ 26264034 (+) False LOC110488181
XM_021560291.2 mRNA downstream 173776 26714111 ~ 26716280 (+) True LOC110488188
XM_021560292.2 mRNA downstream 207607 26747942 ~ 26750163 (+) True LOC110488189
XM_021560296.2 mRNA downstream 261704 26802039 ~ 26810237 (+) False LOC110488192
XM_021560297.2 mRNA downstream 261704 26802039 ~ 26810237 (+) False LOC110488192
XM_021560298.2 mRNA downstream 261704 26802039 ~ 26810237 (+) True LOC110488192
TU2644928 other upstream 214723 26325152 ~ 26325383 (+) True G2312300
TU2644579 other upstream 620306 25919152 ~ 25919800 (+) True G2311978
TU2644105 other upstream 803259 25735194 ~ 25736847 (+) True G2311528
TU2641635 other upstream 2382670 24151687 ~ 24157436 (+) True LOC110488142
TU2641493 other upstream 2559327 23979557 ~ 23980779 (+) False LOC110488133
TU2645416 other downstream 192969 26733304 ~ 26733645 (+) True G2312752
TU2645462 other downstream 276349 26816684 ~ 26820896 (+) False LOC110488193
TU2645463 other downstream 276349 26816684 ~ 26820896 (+) True LOC110488193
TU2645611 other downstream 493464 27033799 ~ 27039185 (+) True G2312933
TU2645715 other downstream 657509 27197844 ~ 27202811 (+) True LOC118946485

Expression Profile