RNA id: TU2650855



Basic Information


Item Value
RNA id TU2650855
length 698
lncRNA type antisense_over
GC content 0.46
exon number 2
gene id G2317696
representative True

Chromosome Information


Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 31241724 ~ 31242509 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


tatatatatattatatatacgtatatagatttgcatatatacgtatatataatatatatacaaaattcAGATTTTGGTTTTGAAATCTTCAATCAAGTCTTTTGTGGTCAGTGATTCCTGAAAGTCTGGTCAGATTTCTCTCAGCCCCCGTGGTTGTCTCAATGGTTGCAGGAATTTTTCATAGAAGTGACTGGTCCAACCATACATGTCCATGCTGGGTGGGGTTCCGGTGGTCTAGTTGGGTGTCTTTACTTCAGGCAGGAAGGGTTTTATTTCATTCTTTCATTTTCTAAGATAATAGGTTTGAAATAGTAGTGGGGGTGGTGGTTTTTCGACAGAATATCCACTCCGAGAAATTGCACGATTTTTGAACATCAGGTATTTTTCTGAGCCGTCCTAATACTCGCCCAGGTTGTGCCACTTGGCAATCTGCCGGCGGGGGTTGTCGCAGACCTCTCTCCAGTGGGTGACCCCAGTGTGCATGAGGCTCTGGCCGCCTAGCACCAGGCGGCCCACCACTTCATTCTTGGTGGTACGGTCGAAGTCGACCACCAGGAACTCCACGGAGATGTCGGCCAGCAGCTCGGCGGGTACATCGTAGATGAATGACTCGTTGAAAACGGGGTTGAGGGTGCACTTCTTCACGTGCGTCTTCTTCTTGGCAATGCGCTTGCAGCCGTAGAACACGTTCACCTTCA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2650848 lncRNA upstream 251 31234987 ~ 31241473 (+) False G2317695
TU2650850 lncRNA upstream 251 31234987 ~ 31241473 (+) True G2317695
TU2650821 lncRNA upstream 30525 31210954 ~ 31211199 (+) True G2317672
TU2650819 lncRNA upstream 31813 31209702 ~ 31209911 (+) True G2317670
TU2650789 lncRNA upstream 85360 31156165 ~ 31156364 (+) True G2317642
TU2650921 lncRNA downstream 69912 31312421 ~ 31312820 (+) True G2317754
TU2650834 lncRNA downstream 279741 31522250 ~ 31522683 (+) True LOC110488276
TU2651038 lncRNA downstream 284890 31527399 ~ 31527748 (+) True G2317866
TU2651039 lncRNA downstream 286551 31529060 ~ 31529270 (+) True G2317867
TU2651040 lncRNA downstream 287132 31529641 ~ 31529939 (+) True G2317868
XM_021560432.2 mRNA upstream 65369 31174238 ~ 31176355 (+) True LOC110488272
XM_036971544.1 mRNA upstream 68256 31157716 ~ 31173468 (+) False LOC110488271
XM_021560453.2 mRNA downstream 92248 31334757 ~ 31340530 (+) False LOC110488286
XM_036970961.1 mRNA downstream 92261 31334770 ~ 31340530 (+) False LOC110488286
XM_036970962.1 mRNA downstream 92261 31334770 ~ 31340530 (+) False LOC110488286
XM_021560451.2 mRNA downstream 102738 31345247 ~ 31352895 (+) False LOC110488285
XM_036971178.1 mRNA downstream 103066 31345575 ~ 31352633 (+) False LOC110488285
TU2650838 other upstream 18162 31222117 ~ 31223562 (+) True G2317685
TU2650704 other upstream 114037 31097619 ~ 31127687 (+) False G2317562
TU2650705 other upstream 114037 31097619 ~ 31127687 (+) False G2317562
TU2650702 other upstream 114037 31121088 ~ 31127687 (+) True G2317562
TU2650554 other upstream 406623 30833730 ~ 30835101 (+) True G2317455
TU2650902 other downstream 92310 31334819 ~ 31340531 (+) True LOC110488286
TU2650828 other downstream 374665 31617174 ~ 31621137 (+) True LOC118946484
TU2652044 other downstream 692374 31934883 ~ 31941550 (+) False LOC110488305
TU2652039 other downstream 692405 31934914 ~ 31941550 (+) False LOC110488305
TU2652047 other downstream 692405 31934914 ~ 31941856 (+) False LOC110488305

Expression Profile