RNA id: TU2652425


Basic Information

Item Value
RNA id TU2652425
length 209
lncRNA type inter_gene
GC content 0.32
exon number 2
gene id G2319106
representative True

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 32092129 ~ 32092383 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

ATACAATATTGTTTTGTATTACTGTAGCTGTCACTAAAGATAACTGCTACAATATTGTTTTGTATTACTGTAGCTGTCACTAAAGATAACTGCTACAATATTGTTTTGTATTACTGTAGCTGTCACTAAAGATAACTGCTACAGTATTGTATTACTGTGGCCGTCACTAAAGATAACTGCTACAATATCGTATTGTATTACTGTAGATG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU2652153 lncRNA upstream 50303 32039690 ~ 32041826 (+) True G2318851
TU2652057 lncRNA upstream 103392 31934963 ~ 31988737 (+) False LOC110488305
TU2652059 lncRNA upstream 139630 31946646 ~ 31952499 (+) True G2318776
TU2652049 lncRNA upstream 141064 31934963 ~ 31951065 (+) False LOC110488305
TU2652612 lncRNA downstream 260592 32352975 ~ 32353821 (+) True LOC110488308
TU2652685 lncRNA downstream 265041 32357424 ~ 32357916 (+) True G2319356
TU2652695 lncRNA downstream 281342 32373725 ~ 32379575 (+) False LOC110488310
TU2652698 lncRNA downstream 284772 32377155 ~ 32377575 (+) True LOC110488310
TU2652701 lncRNA downstream 289297 32381680 ~ 32382325 (+) True G2319371
XM_021560481.2 mRNA upstream 123733 31955665 ~ 31968396 (+) False LOC110488302
XM_036971698.1 mRNA downstream 128540 32220923 ~ 32353844 (+) False LOC110488308
XM_036971695.1 mRNA downstream 128541 32220924 ~ 32353844 (+) False LOC110488308
XM_036971696.1 mRNA downstream 128541 32220924 ~ 32353844 (+) False LOC110488308
XM_036971697.1 mRNA downstream 203222 32295605 ~ 32353844 (+) False LOC110488308
XM_021562155.2 mRNA downstream 274191 32366574 ~ 32369065 (+) False LOC110489447
TU2652081 other upstream 137616 31953622 ~ 31954513 (+) True G2318792
TU2652040 other upstream 150215 31934963 ~ 31941914 (+) False LOC110488305
TU2652038 other upstream 150273 31934963 ~ 31941856 (+) False LOC110488305
TU2653370 other downstream 849820 32942203 ~ 32943392 (+) True G2319921
TU2653501 other downstream 1077080 33169463 ~ 33170117 (+) True LOC110487593
TU2653625 other downstream 1358776 33451159 ~ 33451620 (+) True G2320160
TU2655019 other downstream 2244727 34337110 ~ 34339197 (+) True G2321378
TU2655325 other downstream 2756795 34849178 ~ 34850391 (+) True G2321656

Expression Profile