RNA id: TU2656926



Basic Information


Item Value
RNA id TU2656926
length 278
lncRNA type intronic
GC content 0.44
exon number 1
gene id G2323030
representative True

Chromosome Information


Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 35874663 ~ 35874940 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


CTCCAAGAGTGGACATTAAACCACTAAGACTCTCCAAGGGTGGACATTAAACCACTAACACACTCCAAGGGTGGACATTAAACCACTAAGACTCTCCAAGGGTGGACATTAAACCACTAACACACTCCAAGGACTGACATTAAACCACTAAGACTCTCTGAGGGTGGACATTAAACCACTAACACACTCCAAGGGAGAACATTAAACCACTAACACACTCCGAGGGTGGACATTAAACCACTAACACACTCCAAGGGCTGATATTAAACCACTAAGAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2656924 lncRNA upstream 2273 35872004 ~ 35872390 (+) True G2323028
TU2656922 lncRNA upstream 3954 35870507 ~ 35870709 (+) True G2323026
TU2656921 lncRNA upstream 4588 35869773 ~ 35870075 (+) True G2323025
TU2656920 lncRNA upstream 5479 35868963 ~ 35869184 (+) True G2323024
TU2656917 lncRNA upstream 15686 35858759 ~ 35858977 (+) True G2323021
TU2656929 lncRNA downstream 13352 35888292 ~ 35888561 (+) True G2323033
TU2656931 lncRNA downstream 15592 35890532 ~ 35890920 (+) True G2323035
TU2656933 lncRNA downstream 17802 35892742 ~ 35893060 (+) True G2323037
TU2656934 lncRNA downstream 18173 35893113 ~ 35893347 (+) True G2323038
TU2656938 lncRNA downstream 23500 35898440 ~ 35898661 (+) True G2323042
XM_021562023.2 mRNA upstream 37893 35822735 ~ 35836770 (+) False LOC110489309
XM_021562022.2 mRNA upstream 37893 35822752 ~ 35836770 (+) False LOC110489309
XM_021562043.2 mRNA upstream 55967 35815808 ~ 35818696 (+) True LOC110489318
XM_036971779.1 mRNA upstream 60030 35777248 ~ 35814633 (+) True ago4
XR_002468391.2 mRNA downstream 213168 36088108 ~ 36092060 (+) False LOC110488378
XR_002468392.2 mRNA downstream 213168 36088108 ~ 36092060 (+) False LOC110488378
XM_036971425.1 mRNA downstream 410787 36285727 ~ 36298893 (+) False LOC110511601
XM_036971424.1 mRNA downstream 410790 36285730 ~ 36298893 (+) False LOC110511601
XM_036971426.1 mRNA downstream 416387 36291327 ~ 36298893 (+) False LOC110511601
TU2655413 other upstream 279750 35586587 ~ 35594913 (+) False G2321721
TU2655401 other upstream 279750 35587780 ~ 35594913 (+) False G2321721
TU2655410 other upstream 279750 35590041 ~ 35594913 (+) True G2321721
TU2655405 other upstream 280985 35586587 ~ 35593678 (+) False G2321721
TU2655429 other upstream 364038 35502604 ~ 35510625 (+) True LOC110489253
TU2657401 other downstream 417838 36292778 ~ 36295589 (+) True LOC110511601
TU2657433 other downstream 453464 36328404 ~ 36408978 (+) True G2323520
TU2657653 other downstream 772873 36647813 ~ 36648422 (+) True G2323704
TU2657882 other downstream 1064142 36939082 ~ 37071496 (+) True LOC110488401
TU2657967 other downstream 1177125 37052065 ~ 37062067 (+) True G2324003

Expression Profile