RNA id: TU2656933



Basic Information


Item Value
RNA id TU2656933
length 319
lncRNA type antisense_over
GC content 0.65
exon number 1
gene id G2323037
representative True

Chromosome Information


Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 35892742 ~ 35893060 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


CTGGCACGCTAGTTGACACGTTGACCTGTGTGTAGAACCTCTTGTTGGGCAGGAGCTCCGACACTCCGTTGAGGGCCTCGACCGTCAACGTGTAGTTAGAGTTGGCCAGGAGGTTAACCACGGTCACCGTGCGCTCGGTCACCCCGCTCTGCTGGGGCATGAAGCCCACGCTGGCCCCGCACGGCTCACACTGCAGCCCCACGCACCGGCGGCAGCCCACGCTGTAGGTCAGGTCCCCCCTGCCGCCCGTGTCCGTTGGCGCGCCCCACTCCAGAATCAGGGTGGACTGCTTGAGGGTGTAGACCAAGTCtttgggagg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2656931 lncRNA upstream 1822 35890532 ~ 35890920 (+) True G2323035
TU2656929 lncRNA upstream 4181 35888292 ~ 35888561 (+) True G2323033
TU2656926 lncRNA upstream 17802 35874663 ~ 35874940 (+) True G2323030
TU2656924 lncRNA upstream 20352 35872004 ~ 35872390 (+) True G2323028
TU2656922 lncRNA upstream 22033 35870507 ~ 35870709 (+) True G2323026
TU2656934 lncRNA downstream 53 35893113 ~ 35893347 (+) True G2323038
TU2656938 lncRNA downstream 5380 35898440 ~ 35898661 (+) True G2323042
TU2656939 lncRNA downstream 6624 35899684 ~ 35900124 (+) True G2323043
TU2656941 lncRNA downstream 10329 35903389 ~ 35903784 (+) True G2323045
TU2656982 lncRNA downstream 88524 35981584 ~ 35981808 (+) True G2323086
XM_021562023.2 mRNA upstream 55972 35822735 ~ 35836770 (+) False LOC110489309
XM_021562022.2 mRNA upstream 55972 35822752 ~ 35836770 (+) False LOC110489309
XM_021562043.2 mRNA upstream 74046 35815808 ~ 35818696 (+) True LOC110489318
XM_036971779.1 mRNA upstream 78109 35777248 ~ 35814633 (+) True ago4
XR_002468391.2 mRNA downstream 195048 36088108 ~ 36092060 (+) False LOC110488378
XR_002468392.2 mRNA downstream 195048 36088108 ~ 36092060 (+) False LOC110488378
XM_036971425.1 mRNA downstream 392667 36285727 ~ 36298893 (+) False LOC110511601
XM_036971424.1 mRNA downstream 392670 36285730 ~ 36298893 (+) False LOC110511601
XM_036971426.1 mRNA downstream 398267 36291327 ~ 36298893 (+) False LOC110511601
TU2655413 other upstream 297829 35586587 ~ 35594913 (+) False G2321721
TU2655401 other upstream 297829 35587780 ~ 35594913 (+) False G2321721
TU2655410 other upstream 297829 35590041 ~ 35594913 (+) True G2321721
TU2655405 other upstream 299064 35586587 ~ 35593678 (+) False G2321721
TU2655429 other upstream 382117 35502604 ~ 35510625 (+) True LOC110489253
TU2657401 other downstream 399718 36292778 ~ 36295589 (+) True LOC110511601
TU2657433 other downstream 435344 36328404 ~ 36408978 (+) True G2323520
TU2657653 other downstream 754753 36647813 ~ 36648422 (+) True G2323704
TU2657882 other downstream 1046022 36939082 ~ 37071496 (+) True LOC110488401
TU2657967 other downstream 1159005 37052065 ~ 37062067 (+) True G2324003

Expression Profile