RNA id: TU2657407


Basic Information

Item Value
RNA id TU2657407
length 222
lncRNA type inter_gene
GC content 0.39
exon number 1
gene id G2323497
representative True

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 36299818 ~ 36300039 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

acctacatgtgcatattacctcaattacctcgactaaccggtgcccccgcacattgactctgtactggtaccgccctgtatatagcctcgctattgttattttactgctgctctttaattacttgttacttttattgaAAACaattttggggggtatttttcttaaaactgcattgttggttaaaggcttgtaagtaagcatttcactgtaaggtctacaag

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU2657403 lncRNA upstream 9044 36290523 ~ 36290774 (+) True G2323493
TU2657402 lncRNA upstream 9382 36290147 ~ 36290436 (+) True G2323492
TU2657396 lncRNA upstream 21502 36278109 ~ 36278316 (+) True G2323486
TU2657387 lncRNA upstream 30604 36266267 ~ 36269214 (+) True G2323477
TU2657310 lncRNA upstream 127831 36170355 ~ 36171987 (+) True G2323400
TU2657479 lncRNA downstream 103524 36403563 ~ 36407151 (+) True G2323563
TU2657481 lncRNA downstream 110742 36410781 ~ 36411071 (+) True G2323565
TU2657488 lncRNA downstream 118487 36418526 ~ 36420142 (+) False G2323572
TU2657489 lncRNA downstream 118487 36418526 ~ 36422242 (+) True G2323572
TU2657574 lncRNA downstream 237872 36537911 ~ 36574216 (+) True G2323637
XM_036971425.1 mRNA upstream 925 36285727 ~ 36298893 (+) False LOC110511601
XM_036971424.1 mRNA upstream 925 36285730 ~ 36298893 (+) False LOC110511601
XM_036971426.1 mRNA upstream 925 36291327 ~ 36298893 (+) False LOC110511601
XR_002468391.2 mRNA upstream 207758 36088108 ~ 36092060 (+) False LOC110488378
XR_002468392.2 mRNA upstream 207758 36088108 ~ 36092060 (+) False LOC110488378
XM_036971163.1 mRNA downstream 17032 36317071 ~ 36397386 (+) False LOC110488383
XM_036971164.1 mRNA downstream 17032 36317071 ~ 36397386 (+) True LOC110488383
XM_036971303.1 mRNA downstream 277735 36577774 ~ 36580929 (+) False LOC110489313
XM_036971302.1 mRNA downstream 277841 36577880 ~ 36580929 (+) False LOC110489313
XM_021562032.2 mRNA downstream 277842 36577881 ~ 36580929 (+) True LOC110489313
TU2657401 other upstream 4229 36292778 ~ 36295589 (+) True LOC110511601
TU2655413 other upstream 704905 35586587 ~ 35594913 (+) False G2321721
TU2655401 other upstream 704905 35587780 ~ 35594913 (+) False G2321721
TU2655410 other upstream 704905 35590041 ~ 35594913 (+) True G2321721
TU2655405 other upstream 706140 35586587 ~ 35593678 (+) False G2321721
TU2657433 other downstream 28365 36328404 ~ 36408978 (+) True G2323520
TU2657653 other downstream 347774 36647813 ~ 36648422 (+) True G2323704
TU2657882 other downstream 639043 36939082 ~ 37071496 (+) True LOC110488401
TU2657967 other downstream 752026 37052065 ~ 37062067 (+) True G2324003
TU2658063 other downstream 921840 37221879 ~ 37223573 (+) True G2324095

Expression Profile