Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_036971867.1 |
| length | 3980 |
| RNA type | mRNA |
| GC content | 0.59 |
| exon number | 5 |
| gene id | LOC118946760 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NW_023493658.1 |
| NCBI id | JAAXML020000857.1 |
| chromosome length | 2864942 |
| location | 806485 ~ 949488 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
760,000
780,000
800,000
820,000
840,000
860,000
880,000
900,000
920,000
940,000
960,000
980,000
1,000,000
1,020,000
1,040,000
NW_023493658.1
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU2665481 | lncRNA | downstream | 801 | 785285 ~ 805684 (-) | True | LOC110519451 |
| TU2665532 | lncRNA | downstream | 23463 | 781742 ~ 783022 (-) | True | G2330729 |
| TU2665520 | lncRNA | downstream | 83219 | 723012 ~ 723266 (-) | True | G2330718 |
| TU2665510 | lncRNA | downstream | 120932 | 665333 ~ 685553 (-) | True | G2330708 |
| TU2665489 | lncRNA | downstream | 130352 | 614542 ~ 676133 (-) | True | G2330693 |
| TU2665629 | lncRNA | upstream | 666 | 950154 ~ 950386 (-) | True | G2330801 |
| TU2665630 | lncRNA | upstream | 1022 | 950510 ~ 950721 (-) | True | G2330802 |
| TU2665631 | lncRNA | upstream | 1483 | 950971 ~ 951277 (-) | True | G2330803 |
| TU2665635 | lncRNA | upstream | 6995 | 956483 ~ 956921 (-) | True | G2330807 |
| TU2665636 | lncRNA | upstream | 7807 | 957295 ~ 957555 (-) | True | G2330808 |
| XM_036971873.1 | mRNA | downstream | 10503 | 733803 ~ 795982 (-) | False | LOC110519451 |
| XM_036971872.1 | mRNA | downstream | 301886 | 500426 ~ 504599 (-) | True | LOC118946761 |
| XM_036971893.1 | mRNA | downstream | 400241 | 398109 ~ 406244 (-) | True | LOC110519448 |
| XM_036971894.1 | mRNA | downstream | 400242 | 398109 ~ 406243 (-) | False | LOC110519448 |
| XM_036971888.1 | mRNA | downstream | 432121 | 352820 ~ 374364 (-) | False | LOC118946767 |
| XM_036971898.1 | mRNA | upstream | 128182 | 1077670 ~ 1078368 (-) | False | LOC110513304 |
| XR_005041621.1 | mRNA | upstream | 128186 | 1077674 ~ 1078574 (-) | False | LOC110513304 |
| XM_036971897.1 | mRNA | upstream | 149070 | 1098558 ~ 1113376 (-) | True | LOC110513306 |
| XM_036971892.1 | mRNA | upstream | 243276 | 1192764 ~ 1202030 (-) | False | LOC110513705 |
| XM_036971915.1 | mRNA | upstream | 277923 | 1227411 ~ 1235588 (-) | False | LOC110511394 |
| TU2665505 | other | downstream | 121655 | 664211 ~ 684830 (-) | True | G2330705 |
| TU2665500 | other | downstream | 171606 | 633911 ~ 634879 (-) | True | G2330702 |
| TU2664995 | other | downstream | 765375 | 39516 ~ 41110 (-) | True | G2330314 |
| TU2666377 | other | upstream | 250659 | 1200147 ~ 1201986 (-) | False | LOC110513705 |
| TU2666376 | other | upstream | 251024 | 1200512 ~ 1201986 (-) | True | LOC110513705 |
| TU2666383 | other | upstream | 275920 | 1225408 ~ 1425079 (-) | False | G2331305 |
| TU2666386 | other | upstream | 275920 | 1225408 ~ 1425079 (-) | False | G2331305 |
| TU2666389 | other | upstream | 275920 | 1225408 ~ 1425079 (-) | False | G2331305 |
