RNA id: TU2666691



Basic Information


Item Value
RNA id TU2666691
length 254
RNA type TUCP
GC content 0.57
exon number 2
gene id G2331536
representative True

Chromosome Information


Item Value
chromosome id NW_023493658.1
NCBI id JAAXML020000857.1
chromosome length 2864942
location 1951097 ~ 1993315 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


GTGTAGAAGAATGTATGATCTCCGtcctggactcacagtgatctgctcagATCTCCTGGTCCAGCCTGATATCTTCCTGACTGACCCAATGGGAGGGGTCTTCAGGGGCCACCAGGGGCCCGAGATGTTCAGGGGCTACAACTTCACCATCACCTGCTCCACTCAGCCACAGTACCCAGGAGGCTCCTTCCTCCTCACATTCACCGGCACCAACAGAACCCAGACCCAGccagctgtcaatcactctgctgcct

Function


GO: NA

KEGG: NA

JBrowse2


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Neighbor


RNA id RNA type direction distance location representative gene id
TU2666681 lncRNA downstream 55563 1875707 ~ 1895534 (-) True LOC118946762
TU2666676 lncRNA downstream 58532 1872479 ~ 1892565 (-) True G2331523
TU2666682 lncRNA downstream 61157 1883267 ~ 1889940 (-) True G2331528
TU2666677 lncRNA downstream 76785 1873470 ~ 1874312 (-) True G2331524
TU2666672 lncRNA downstream 78986 1870801 ~ 1872111 (-) False G2331522
TU2666705 lncRNA upstream 22344 2015659 ~ 2016595 (-) True G2331549
TU2666712 lncRNA upstream 45857 2039172 ~ 2039670 (-) True G2331555
TU2666714 lncRNA upstream 46907 2040222 ~ 2045708 (-) True G2331556
TU2666724 lncRNA upstream 52308 2045623 ~ 2055072 (-) True G2331562
TU2666727 lncRNA upstream 69395 2062710 ~ 2063715 (-) True G2331564
XM_036971874.1 mRNA downstream 54389 1894367 ~ 1896708 (-) False LOC118946762
XM_036971910.1 mRNA downstream 524761 1418841 ~ 1426336 (-) True LOC110518942
XM_036971909.1 mRNA downstream 524763 1418841 ~ 1426334 (-) False LOC110518942
XM_036971911.1 mRNA downstream 525991 1418841 ~ 1425106 (-) False LOC110518942
XM_036971912.1 mRNA downstream 525991 1418841 ~ 1425106 (-) False LOC110518942
LOC118946763 mRNA upstream 16225 2009540 ~ 2012481 (-) True LOC118946763
XM_036971895.1 mRNA upstream 161420 2154735 ~ 2166885 (-) False LOC110497191
XM_021573179.2 mRNA upstream 161420 2154735 ~ 2176616 (-) False LOC110497191
XR_005041624.1 mRNA upstream 245647 2238962 ~ 2239607 (-) False LOC118946770
TU2666680 other downstream 74145 1875707 ~ 1876952 (-) False LOC118946762
TU2666391 other downstream 526018 1226616 ~ 1425079 (-) False G2331305
TU2666379 other downstream 715553 1226616 ~ 1235544 (-) False G2331305
TU2666711 other upstream 44572 2037887 ~ 2039068 (-) True G2331554
TU2667001 other upstream 548727 2542042 ~ 2544584 (-) True G2331771
TU2667251 other upstream 813657 2806972 ~ 2808389 (-) False G2331942
TU2667254 other upstream 813657 2806972 ~ 2808389 (-) False G2331942
TU2667255 other upstream 813657 2806972 ~ 2808389 (-) False G2331942

Expression Profile


TU2666691 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 1.
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TU2666691 Expression in each Bioproject

Bar chart with 8 bars.
TU2666691 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 6.
End of interactive chart.