RNA id: TU2667249


Basic Information

Item Value
RNA id TU2667249
length 1842
lncRNA type antisense_over
GC content 0.49
exon number 2
gene id G2331942
representative False

Chromosome Information

Item Value
chromosome id NW_023493658.1
NCBI id JAAXML020000857.1
chromosome length 2864942
location 2755110 ~ 2809111 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

GTAATGGGGACTTTGCCACGTCATTGACTTCAGCTTTATTATGTCCAATCCGTTGGTCACAATGAAAAGTGATACACTGACAggtaccacacagacacacaggctacATCCCAAACTGATACACTGACAggtaccacacagacacacaggctacATCCCAAACTGATACACTGACAGgtaccatacagacacacaggctgcatcccaaacggaaccacattctctagatAGTGTCTAGGACTCTAGGCTTCTAGGGAAGAGGATGCCATATTGGACGTGGGACACACTCTGCCGACCTTACACCACGGAGACTTGTGAttgacacacacactttcaattaCCAATAATTAAATATTTAGCATTTacacaaaaatacaaataatgtcGGAGTAGAAAAAACTACATGGATTGATAATATCTGATCGATGCAGTGGaacatataaaaaaatatttgtttttcatttgttttacTTCTGTACAAACATACATATAaatatagatagaaagagagagtataAAAGTGTGTATTTTTAAAATACAAAGGGGGGTTTGTACACCACAGTTATTGACGTTCACATGACAAGGAGACATATGGCAAAACATTTTGAGGGCATCTCTTTTCACAGTAACGTGGGGCTGTACATTATAAATGCAAACGCTGTTCATAGTAATTTCTCTCCTAGTTCTTTCACATTGTTATAAACATGAAGGAGTTTAGAAATGTGTCTCTGGGCGTTGGTTCAAGCCTTGTTGATCTGTGGCCCAACCACAACGTCACAAACAACGTTGAAACGTCTCACCAACGTTTAAAATGTCTTAAGATCCCAGAAAAACCATCAGTGCTATAGGATCAGTTCATCTTCCTGTTTAATGGTCCTTGGCCTCTCATTgggcactctgtctctctctctctctctctctctctctctctctctgtctctctctctctctctccgtctctctctctctctctctctgtctctctctctccgtctctctctctctctccgtctctcgctctctccatctctcgctctctctccatctctctctctctctctgtctctctctctgtctctctttttctttccatctctctctctctccccgtctctctctctccatctctctctctccatctctctctctctctccgtctctctctaggTCTGCCTGGCGTCCTGTAGTAGTTTATTAATCTCGGTGACCAACTCACTAGCGTCCATCATGTCATCGTGTCTGTCACTGCGTTGCTTCCTCCCCATCCCTAGCATctccagctcatcctcctcataGTTTTCTGGGATCTCCTCCATGGCAGGCAGCCATCTTAGGTGTGGTGGCTggttggaggaggaagaggtggtggACGAGGCGGCCAAGTTGGTGAGGTTGTTGGTGTTGTGACTTGATGGGCTTTGGCCGACAGCTCCGCCTCCGGGGTTCAGATAGTGGGTGTTAGCCGCCCACGCCGCCACGCCTGCCGGGTAGGAGGCGGGGCCTTTGGTGTTGTTGCCGCCCGTTAACAGCACCTTGGCGTGGCCACCCTTTCCACTTCCTCGTTCCGTTGCCGCGGCGGCAACGTTGTTTTCGCTGCACTCGGCGTACGAATCCAGTGACGGAGGGAGCAGGCGCCGGAAGATTCCGTTCATCTCCGAAAGCAAGGAACCCCCTTCACTGACCCCTTCCTCCTCAGAACTCCCGGGCTCCTTCCCGAAGGTGGAGAAGCTCTTCCTGCGCTCCGAGGAGTCGATGGAAGCCTGGTCGTCATCGAGGAGGTGGGGGGGCTGGTTAGAGGACTCCTCCCCTGGGATAAACATGTTGCTACGGtagtcagaggaa

Function

GO: NA

KEGG: NA

JBrowse2

Loading

Neighbor

RNA id RNA type direction distance location representative gene id
TU2667267 lncRNA downstream 24765 2781594 ~ 2782207 (-) True G2331950
TU2667237 lncRNA downstream 67070 2733609 ~ 2739902 (-) False G2331938
TU2667230 lncRNA downstream 68541 2737687 ~ 2738431 (-) True G2331938
TU2667235 lncRNA downstream 69897 2733329 ~ 2737075 (-) False G2331938
TU2667231 lncRNA downstream 69897 2734599 ~ 2737075 (-) False G2331938
TU2667292 lncRNA upstream 15947 2825058 ~ 2825337 (-) True G2331969
TU2667294 lncRNA upstream 17103 2826214 ~ 2826580 (-) True G2331971
TU2667297 lncRNA upstream 23255 2832366 ~ 2832596 (-) True G2331974
XR_005041624.1 mRNA downstream 567365 2238962 ~ 2239607 (-) False LOC118946770
XM_021573179.2 mRNA downstream 630356 2154735 ~ 2176616 (-) False LOC110497191
XM_036971895.1 mRNA downstream 640087 2154735 ~ 2166885 (-) False LOC110497191
LOC118946763 mRNA downstream 794491 2009540 ~ 2012481 (-) True LOC118946763
XM_036971881.1 mRNA downstream 853406 1934506 ~ 1953566 (-) False LOC110511350
TU2667001 other downstream 262388 2542042 ~ 2544584 (-) True G2331771
TU2666711 other downstream 767904 2037887 ~ 2039068 (-) True G2331554
TU2666691 other downstream 813657 1951097 ~ 1993315 (-) True G2331536
TU2666680 other downstream 930020 1875707 ~ 1876952 (-) False LOC118946762
TU2666392 other downstream 1571428 1226616 ~ 1235544 (-) False G2331305

Expression Profile

TU2667249 Expression in all Baseline Samples

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The chart has 1 Y axis displaying values. Range: 0 to 2.
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TU2667249 Expression in each Bioproject

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TU2667249 Expression in each Sample
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The chart has 1 Y axis displaying Expression. Range: 0 to 30.
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