RNA id: TU2671388



Basic Information


Item Value
RNA id TU2671388
length 207
lncRNA type inter_gene
GC content 0.32
exon number 1
gene id G2334796
representative True

Chromosome Information


Item Value
chromosome id NW_023493660.1
NCBI id JAAXML020000588.1
chromosome length 1886234
location 1474412 ~ 1474618 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


TGGTCTGTTTCTGTCTTCTTCACCGACAGGGGAAGATCCTTCTTATTTAAAGTATAGGTACAATGGGAAAGTATTCAATTTGATTAACTTTGTCAAATTTACCAATTAAAAAAACCCAACTAGGACAAAAGGAATGTTTCAGGTTGGTAAACTCTATTACATAATTCCCTCATCACCTGGTCATTATATAAACATCATGTATATAAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2671387 lncRNA upstream 480 1473725 ~ 1473932 (+) True G2334795
TU2671383 lncRNA upstream 7218 1465988 ~ 1467194 (+) True G2334791
TU2671380 lncRNA upstream 18199 1455905 ~ 1456213 (+) True G2334788
TU2671372 lncRNA upstream 87453 1386672 ~ 1386959 (+) True G2334780
TU2671322 lncRNA upstream 106369 1367399 ~ 1368043 (+) True G2334748
TU2671390 lncRNA downstream 2891 1477509 ~ 1477834 (+) True G2334798
TU2671398 lncRNA downstream 8829 1483447 ~ 1483967 (+) True G2334806
TU2671399 lncRNA downstream 9689 1484307 ~ 1484676 (+) True G2334807
TU2671401 lncRNA downstream 15837 1490455 ~ 1491071 (+) True G2334809
TU2671403 lncRNA downstream 19659 1494277 ~ 1495389 (+) True G2334811
XM_036972046.1 mRNA upstream 101045 1329818 ~ 1373367 (+) False LOC118947021
XM_036972045.1 mRNA upstream 101045 1329840 ~ 1373367 (+) False LOC118947021
XR_005041650.1 mRNA upstream 101045 1329840 ~ 1373367 (+) False LOC118947021
XM_036972072.1 mRNA upstream 398433 1066695 ~ 1075979 (+) False LOC110515544
XM_036972050.1 mRNA downstream 220319 1694937 ~ 1727043 (+) False LOC110515857
XM_036972049.1 mRNA downstream 220319 1694937 ~ 1736967 (+) False LOC110515857
XM_036972051.1 mRNA downstream 220319 1694937 ~ 1736967 (+) True LOC110515857
XM_036972088.1 mRNA downstream 304823 1779441 ~ 1835837 (+) False LOC110515110
TU2671317 other upstream 127631 1329888 ~ 1346781 (+) False LOC118947021
TU2670917 other upstream 473245 1000333 ~ 1001167 (+) False LOC110511817
TU2670699 other upstream 660684 813079 ~ 813728 (+) True LOC110513287
TU2670188 other upstream 990896 483086 ~ 483516 (+) True G2333977
TU2670172 other upstream 1010421 459378 ~ 463991 (+) True G2333965
TU2671728 other downstream 304840 1779458 ~ 1835761 (+) False LOC110515110

Expression Profile