RNA id: TU2676827


Basic Information

Item Value
RNA id TU2676827
length 1498
lncRNA type inter_gene
GC content 0.35
exon number 3
gene id G2338426
representative False

Chromosome Information

Item Value
chromosome id NW_023493664.1
NCBI id JAAXML020000507.1
chromosome length 1504970
location 26748 ~ 35120 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

actatatcaactatattatgacagaccagctagatctacaatctctatgatattacgacagaccagctagagaaactgtctctattaaattacaacagaccagctagatctactgtctctattatattatgacagaccagctagatctgctgtctctattatattataacagaccagctagatctaaaaTCTCTatgatattacgacagaccagctagagaaactgtctctattaaattacaacagaccagctagatctactgtctctattatattatgacagaccagctggatctactgtatctattatattatgacagaccagctagatctactgtctctattacattatgacagaccagctggatctactgtgtctattataatatgacagaccagctagatctactgtctctattaaaatatgacagaccagctagatctactgtctctattatattatgacagaccagctggatctactgtctctattataatatgacagaccagctagatctactgtctctattataatatgacagaccagctagatctactgtctctgttatattatgaccagccagacatactgtctctattataatatgacagaccagctagatttacaaTCTCTATGATATTACGATAGACCATCTAGAgaaactgtctctattaaattacaacagaccagctagatctactgtctctattatattatgacagaccagctagatctactgtatctattatattatgacagaccagctagatctactgttactactatattatgacagaccagctagatctactatatcaactatattatgacagaccagctagatctacaatctCTATGATATTACGATAGACCATCTAGAgaaactgtctctattaaattacaacagaccagctagatctactgtctctattatattatgacagaccagctagatctactgtatctattatattatgacagaccagctagatctactgttactactatattatgacagaccagctagatctactatatcaactatattatgacagaccagctagatctacaatctctatgatattacgacagaccagctagagaaactgtctctattaaattacaacagaccagctagatctactgtctctattatattatgacagaccagctagatctgctgtctctattatattataacagaccagctagatctaaaaTCTCTatgatattacgacagaccagctagagaaactgtctctattaaattatgacagaccagctggatctactgtatctattatattatgacagaccagctagatctactgtctctattatattatgacagaccagctggatctactgtgtctattataatatgacagaccagctagatctactgtctctattaaaatatgacagaccagctagatctactgtctctattatattatgacagaccagctggatctactgtgtctattataatatgac

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU2676837 lncRNA upstream 8187 42428 ~ 43093 (-) True G2338431
TU2677075 lncRNA upstream 13484 47725 ~ 48842 (-) False LOC118947117
TU2677076 lncRNA upstream 13484 47725 ~ 48842 (-) False LOC118947117
TU2677078 lncRNA upstream 13484 47725 ~ 48842 (-) False LOC118947117
TU2677079 lncRNA upstream 13484 47725 ~ 48842 (-) False LOC118947117
XR_005041772.1 mRNA upstream 13382 47623 ~ 48287 (-) False LOC118947117
XR_005041773.1 mRNA upstream 13382 47623 ~ 48300 (-) False LOC118947117
XM_036972331.1 mRNA upstream 18904 53145 ~ 118089 (-) False LOC110511686
XM_036972342.1 mRNA upstream 213110 247351 ~ 293320 (-) True prpsap2
XM_036972304.1 mRNA upstream 412259 446500 ~ 512457 (-) False LOC110511701
TU2677092 other upstream 13382 47623 ~ 51453 (-) False LOC118947117
TU2677097 other upstream 18193 52434 ~ 55362 (-) True LOC110511686
TU2677107 other upstream 150136 184377 ~ 186655 (-) True G2338590
TU2677207 other upstream 343938 378179 ~ 378883 (-) True G2338672
TU2677193 other upstream 428291 462532 ~ 479061 (-) True LOC110511701

Expression Profile