RNA id: TU2677756



Basic Information


Item Value
RNA id TU2677756
length 295
lncRNA type antisense_over
GC content 0.38
exon number 1
gene id G2339024
representative True

Chromosome Information


Item Value
chromosome id NW_023493664.1
NCBI id JAAXML020000507.1
chromosome length 1504970
location 703484 ~ 703821 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


TTGAGGTTGTCGCTTTACCTGAGTGTTCACTGGCGGAGTTGGCTGTGATTTCTCATGTTTGCTTGCACTTTCTGTTCAGTTCGGTATCTGTTTGGGCTAACCTAGCTAGCCTAGCTAGCTTAACGACAGACCAATAATCGCTACCCGTTTATACTTCGAATGACCTACTTATTAACCAGTTATATATCTAATAAGCTGGCTATGTAATAATTAACAAAACGCTATATATAGGTCGTTCAATCTCATAACTCGGATGTTATTGAATGtcccaaacaacaacaaaaaaacattcaaa

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2677747 lncRNA downstream 1203 692656 ~ 702324 (-) True G2339019
TU2677746 lncRNA downstream 7675 692656 ~ 695852 (-) False G2339019
TU2677736 lncRNA downstream 21810 680731 ~ 681717 (-) False G2339017
TU2677759 lncRNA upstream 6591 710412 ~ 711989 (-) False G2339026
TU2677758 lncRNA upstream 7184 711005 ~ 711989 (-) True G2339026
TU2677760 lncRNA upstream 8245 712066 ~ 713110 (-) False G2339027
TU2677761 lncRNA upstream 8245 712066 ~ 713110 (-) False G2339027
TU2677762 lncRNA upstream 8245 712066 ~ 713110 (-) True G2339027
XM_036972303.1 mRNA downstream 191055 446500 ~ 512472 (-) False LOC110511701
XM_036972305.1 mRNA downstream 191055 459697 ~ 512472 (-) False LOC110511701
XM_036972304.1 mRNA downstream 191070 446500 ~ 512457 (-) False LOC110511701
XM_036972342.1 mRNA downstream 410207 247351 ~ 293320 (-) True prpsap2
XM_036972331.1 mRNA downstream 585438 53145 ~ 118089 (-) False LOC110511686
XM_036972314.1 mRNA upstream 76945 780766 ~ 808870 (-) True LOC110517482
XR_005041775.1 mRNA upstream 95342 799163 ~ 800016 (-) True LOC118947119
XM_036972318.1 mRNA upstream 151541 855362 ~ 957736 (-) False LOC110516334
XM_036972323.1 mRNA upstream 151541 855362 ~ 958476 (-) False LOC110516334
XM_036972324.1 mRNA upstream 151541 855362 ~ 958476 (-) False LOC110516334
TU2677748 other downstream 7675 692505 ~ 695852 (-) False G2339019
TU2677314 other downstream 37430 663537 ~ 666097 (-) True G2338752
TU2677315 other downstream 38842 664228 ~ 664685 (-) True G2338753
TU2677280 other downstream 133149 569827 ~ 570378 (-) True G2338725
TU2677193 other downstream 224466 462532 ~ 479061 (-) True LOC110511701
TU2677784 other upstream 135362 839183 ~ 844104 (-) False G2339043
TU2677876 other upstream 237155 940976 ~ 941892 (-) True G2339109
TU2677813 other upstream 259328 963149 ~ 969154 (-) True G2339060
TU2677900 other upstream 294110 997931 ~ 999857 (-) False G2339121
TU2677806 other upstream 297198 1001019 ~ 1002907 (-) True LOC110513313

Expression Profile