RNA id: TU2677861



Basic Information


Item Value
RNA id TU2677861
length 291
lncRNA type intronic
GC content 0.39
exon number 2
gene id G2339097
representative True

Chromosome Information


Item Value
chromosome id NW_023493664.1
NCBI id JAAXML020000507.1
chromosome length 1504970
location 862731 ~ 863147 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


GTCTGTGGATTATGTTATTTCTGTTAGGTCTGTGGATTATGTTATTCCTGTTAGGTCTGTGGATTATGTTATCCCTGTTAGGTCTGTGAATTCTGTTATCCCTGTTAGGTCTGTGATTTCTGTTATTCCTGTTAGGTCTGTGGATTATGTTATTCCTGTTAGGTCTGTGGATTATGTTATTCCTGTTAGGTCTGTGGATTATGTTATTCCTGTTAGGTCTGTGGATTATGTTAACCCTGTTAGGTCTGTTAACCCTGTTAGGTCTGTGGATTATGTTAACCCTCTTAGGTC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2677860 lncRNA downstream 4951 857248 ~ 857780 (-) True G2339096
TU2677789 lncRNA downstream 18627 839183 ~ 844104 (-) False G2339043
TU2677864 lncRNA upstream 10724 873871 ~ 874561 (-) True G2339099
TU2677810 lncRNA upstream 30141 893288 ~ 923607 (-) True G2339057
TU2677872 lncRNA upstream 41171 904318 ~ 905325 (-) True G2339106
TU2677880 lncRNA upstream 78996 942143 ~ 942997 (-) True G2339110
TU2677883 lncRNA upstream 80228 943375 ~ 944169 (-) True G2339111
XM_036972314.1 mRNA downstream 53861 780766 ~ 808870 (-) True LOC110517482
XR_005041775.1 mRNA downstream 62715 799163 ~ 800016 (-) True LOC118947119
XM_036972303.1 mRNA downstream 350259 446500 ~ 512472 (-) False LOC110511701
XM_036972305.1 mRNA downstream 350259 459697 ~ 512472 (-) False LOC110511701
XM_036972304.1 mRNA downstream 350274 446500 ~ 512457 (-) False LOC110511701
XM_036972330.1 mRNA upstream 110594 973741 ~ 1003184 (-) False LOC110513313
XM_036972326.1 mRNA upstream 163598 1026745 ~ 1048179 (-) False LOC110518374
XR_005041780.1 mRNA upstream 220825 1083972 ~ 1084783 (-) False LOC118947123
XM_036972337.1 mRNA upstream 294905 1158052 ~ 1183417 (-) False LOC110516784
XM_036972302.1 mRNA upstream 463521 1326668 ~ 1417233 (-) False LOC110516509
TU2677784 other downstream 18627 839183 ~ 844104 (-) False G2339043
TU2677748 other downstream 166879 692505 ~ 695852 (-) False G2339019
TU2677314 other downstream 196634 663537 ~ 666097 (-) True G2338752
TU2677315 other downstream 198046 664228 ~ 664685 (-) True G2338753
TU2677280 other downstream 292353 569827 ~ 570378 (-) True G2338725
TU2677876 other upstream 77829 940976 ~ 941892 (-) True G2339109
TU2677813 other upstream 100002 963149 ~ 969154 (-) True G2339060
TU2677900 other upstream 134784 997931 ~ 999857 (-) False G2339121
TU2677806 other upstream 137872 1001019 ~ 1002907 (-) True LOC110513313
TU2677915 other upstream 163852 1026999 ~ 1029218 (-) True LOC110518374

Expression Profile