RNA id: TU2677961



Basic Information


Item Value
RNA id TU2677961
length 267
lncRNA type intronic
GC content 0.28
exon number 2
gene id G2339154
representative True

Chromosome Information


Item Value
chromosome id NW_023493664.1
NCBI id JAAXML020000507.1
chromosome length 1504970
location 1090302 ~ 1090593 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ccgattcattataatacacacaatacactgtttcattataatacacaatacaccgattcattataatacaccgattcattataatacacacaatacaccgattcattataatacacacaatacaccgatTCATTAttatacacacaatacactgtttcattataatacacacaatacactgtttcattataatacacaatacactgtttcattataatacacacaatacacggATTCATTATAATACACCGATTCATTATAATACAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2677956 lncRNA downstream 3999 1083692 ~ 1086303 (-) True LOC118947123
TU2677954 lncRNA downstream 4653 1083692 ~ 1085649 (-) False LOC118947123
TU2677948 lncRNA downstream 11346 1075708 ~ 1078956 (-) True G2339146
TU2677936 lncRNA downstream 16353 1073281 ~ 1073949 (-) False G2339139
TU2677970 lncRNA upstream 6904 1097497 ~ 1105329 (-) True G2339157
TU2677971 lncRNA upstream 20586 1111179 ~ 1121122 (-) True G2339158
TU2677962 lncRNA upstream 43829 1134422 ~ 1134754 (-) True G2339155
TU2677980 lncRNA upstream 45802 1136395 ~ 1137043 (-) True G2339167
TU2677981 lncRNA upstream 46801 1137394 ~ 1138351 (-) True G2339168
XR_005041780.1 mRNA downstream 5519 1083972 ~ 1084783 (-) False LOC118947123
XM_036972326.1 mRNA downstream 42123 1026745 ~ 1048179 (-) False LOC110518374
XM_036972330.1 mRNA downstream 87118 973741 ~ 1003184 (-) False LOC110513313
XM_036972321.1 mRNA downstream 131823 855362 ~ 958479 (-) False LOC110516334
XM_036972337.1 mRNA upstream 67459 1158052 ~ 1183417 (-) False LOC110516784
XM_036972302.1 mRNA upstream 236075 1326668 ~ 1417233 (-) False LOC110516509
XM_036972300.1 mRNA upstream 236075 1326668 ~ 1417782 (-) False LOC110516509
XM_036972301.1 mRNA upstream 238305 1328898 ~ 1417783 (-) False LOC110516509
XM_036972341.1 mRNA upstream 345906 1436499 ~ 1488403 (-) False LOC118947127
TU2677915 other downstream 61084 1026999 ~ 1029218 (-) True LOC110518374
TU2677806 other downstream 87395 1001019 ~ 1002907 (-) True LOC110513313
TU2677900 other downstream 90445 997931 ~ 999857 (-) False G2339121
TU2677813 other downstream 121148 963149 ~ 969154 (-) True G2339060
TU2677876 other downstream 148410 940976 ~ 941892 (-) True G2339109
TU2677965 other upstream 17139 1107732 ~ 1122639 (-) True G2339156
TU2677994 other upstream 67954 1158547 ~ 1159571 (-) False LOC110516784
TU2678050 other upstream 144611 1235204 ~ 1235588 (-) True G2339202
TU2678053 other upstream 151481 1242074 ~ 1243382 (-) False G2339205
TU2678054 other upstream 151481 1242074 ~ 1243213 (-) True G2339205

Expression Profile